Coregonus clupeaformis (lake whitefish): 121569363
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Entry
121569363 CDS
T08357
Name
(RefSeq) guanine nucleotide exchange factor VAV3 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121569363
09142 Cell motility
04810 Regulation of actin cytoskeleton
121569363
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
CDC24
RHG20_PH
LZ3wCH
SRA1
Prok-RING_1
C1_2
PH_10
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
121569363
NCBI-ProteinID:
XP_041736190
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Position
7:complement(51775277..51944125)
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AA seq
843 aa
AA seq
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MEYWRQCASWLINCKVLPPDHRVTWESAQVFDLAQTLRDGVLLCQLLNNLQPQSIDLKAI
NLRPQMSQFLCLKNIRTFLAACCETFGMKKSELFEAFDLFDVRDFGKVLDTLSKLSSTTI
SEQTGIKAFPSEDSLEEDEDIYNHLVDLIDEKGVEDEEDLYDCVYHDEDGGEIYEDLMKA
EAVPPPLPFQKQVETDIRSYCLTEIKQTEEKYTETLDSIEKYFMAPLTTFLSSVEMKKVF
VNIPDLVKVHKTLMVAIRDSVCHKSAQNLYQIFINYKERLLIYGKYCSHVETAIITLDVI
CKDREDVRMKLEECAKRANYGKFTLRDLLVVPMQRVLKYPLLLQELVKHTHDAADKSNLR
MALDAIKDLAQYINEVKRDNETLRDIAQYQKSIENLNQSLSMYGRPKGDGEVRIASVDKR
AKQDRHIFLFDAAVFVCKRRGDNYEMKEMIDLHHFKITNNPTSDKETRKWSYGIYLTHSQ
GQNGFDFFFKTKELKKKWLEQFGMAISNIRPENGTSNFHEFKMHTFDRITSCSSCHMLLR
GIFNQGYLCSKCGVGAHKECLGRFGGCGKTDPGSLKTQDKSVPGRRSDPGLPKMLVTRNY
SGMPSPMVGPPLNIQQGDIIELVCADLHSSWWQGKIVTTREVGFFPSNAVKPCPCVPKPV
DYSTQPWFAGPMERLQAEAELISRGNSTYLVRHRSRELTEYAISIKYSNDVKHIKILNRD
GCFHITENNKFKSILELIEYYQHYSLKEGFRSLDTTLQFPYREQESAAVLCTNRPGGNLF
TPKVMGVAIARYDFSSRDTRELSLQEGDVVKIYTKSGANGWWRGEVNGRLGWFPSTYVEE
GEE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagtattggaggcagtgcgcatcatggctgatcaactgtaaggtgcttccacccgac
catcgggtaacatgggagtctgcccaggtattcgacctggctcagaccctccgagatgga
gtgctcctgtgtcagcttctcaacaacctccaaccccagtccatcgacctcaaagcgatc
aacctccgacctcagatgtcacagttcctgtgcttgaagaacatcaggacgttcctcgct
gcatgctgtgagacgtttggcatgaagaagagtgaactctttgaggccttcgacttgttt
gatgtgcgggactttggaaaggttttggacacattgtccaaactatccagcactacgatt
tcagaacaaacaggaataaaggcttttccttcagaggacagtctagaagaagatgaggac
atttataaccatctggtggacctgatcgatgagaaaggcgtggaggatgaagaggatctg
tatgactgtgtctaccatgatgaagatggtggtgagatctacgaagatctgatgaaggct
gaggctgttcctcctcctctgccgttccagaaacaggtagagacggacatcaggagctac
tgtctgacagagatcaagcagactgaggagaagtacacagagactctggactccatagag
aagtattttatggcacctcttaccacgttcctgtcctcagtggagatgaagaaagtgttt
gtcaacattccggacctggttaaagttcacaagactctgatggtggcgatacgagactct
gtctgccataaaagtgcccagaacctctaccagatcttcatcaactacaaagagaggttg
ctaatatatgggaaatactgtagccatgtagaaacggccatcattactttggatgtcatc
tgcaaagacagggaagatgtccgaatgaagctggaggaatgtgcaaagagagccaactat
ggcaagtttacactgagagatctgctggttgtccccatgcagcgggtactgaagtatccc
cttcttctacaggaattagtgaaacacactcacgacgcggctgacaagagcaatttgcgg
atggccctggatgccataaaggatctggctcagtacatcaacgaagtgaagagagacaac
gagaccctgagagacatagcccagtatcagaaatccattgaaaaccttaatcagtctctt
agtatgtatggccgaccaaaaggagacggagaggtccgcattgcctcagtcgacaaacgt
gccaaacaggaccggcacatcttcctgttcgatgctgctgtgttcgtctgtaagaggaga
ggagacaactacgagatgaaggagatgatcgacctgcaccacttcaagatcaccaacaac
cccacatcagacaaggagaccagaaagtggtcctatggaatctacctgacacacagccag
gggcagaacggcttcgacttcttcttcaagaccaaggagctgaagaagaagtggctggag
cagtttggcatggccatatccaacatccgtccagagaacggcaccagtaacttccacgag
ttcaagatgcacaccttcgacagaatcacatcctgtagctcctgccacatgctgctaagg
ggtatctttaaccaggggtacctgtgctccaagtgtggtgttggagcccataaggaatgt
ctggggaggtttggtggctgtggaaaaacagatccgggctccttaaaaactcaggacaaa
tccgtgcctggacgtcgctcagatccaggtctacctaaaatgttggtgaccaggaactat
tccggcatgcccagtcccatggttggcccgcccctcaacatccagcaaggtgacatcatc
gagctggtctgtgctgatctacacagctcctggtggcagggcaaaatcgtgacaacgaga
gaagttggcttctttccaagcaacgccgtgaagccgtgcccatgtgtcccaaaacctgtc
gactactccacacaaccctggtttgctgggcccatggagagactgcaggctgaggcagag
ctgattagcagaggcaacagcacttacctggtccgtcaccggagccgtgagctcacagag
tacgccatcagcatcaagtacagcaacgacgtgaagcacatcaagatactgaacagggac
ggctgctttcacatcacagagaacaacaagttcaagagtatattagaactgattgagtac
taccaacattactccctgaaggaaggcttcagaagcctggacaccacactgcagttcccc
tacagagagcaggagagcgctgctgtgctctgcaccaacagacctggaggaaacctgttc
accccgaaggtgatgggtgtggcgatagcccgctatgacttcagctccagagacaccaga
gagctgtctctacaggagggagacgtggtcaagatctacaccaagtcaggagcaaatggc
tggtggaggggagaggtcaacggcaggctgggctggttcccctctacctatgtggaggaa
ggagaggagtga
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