Coregonus clupeaformis (lake whitefish): 121569412
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Entry
121569412 CDS
T08357
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03420
Nucleotide excision repair
cclu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121569412 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
121569412 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121569412 (rad23aa)
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121569412 (rad23aa)
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121569412 (rad23aa)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121569412 (rad23aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
OTU1_UBXL
SWI-SNF_Ssr4_C
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
121569412
NCBI-ProteinID:
XP_041736278
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDPDQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKSATATSTPSSEAPKAPVQDSGSSSSAGPAPAAIPIPPEETTP
TVTEPPAPASSDPSVEVQGGDASSALVTGAEYETMLTEIMSMGYERERVVAALRASFNNP
HRAVEYLLTGIPSSPVQETNPPAQLPASARPGTETPTVAEGENPLEFLRSQPQFQSMRQV
IQQNPSLLPALLQQLGRENPQLLQQISQYQELFIQMLNEPAGEVGDVPEVGDLGAAVEEG
APVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQGFEDE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcacgctaaaaacactgcaacagcagaccattcaaattgacatagaccctgat
caaacggtgaaggcactgaaggagaagatagaagcagagaggggaaaagataacttccca
gtgtctggacagaagctcatatatgctggcaaaatcctgcaagatgacacgcctattaaa
gactacaaaattgacgagaagaatttcgttgtagttatggtatcgaaggcaaagtctgcc
acagccacttcaacaccttcctcagaggcacccaaggcccctgtccaggactctgggtcc
tcgtcgtctgcgggcccggcccctgcagccatccccatccccccagaggagactacacct
acagtcacagagcccccggctccagctagctcagaccccagtgtggaggtccagggggga
gatgcctcctctgccttggtgacaggagcggagtatgagaccatgctgacagagatcatg
tctatgggttatgagagggagagagtggtagctgctctccgggccagcttcaacaaccca
catcgggctgtggagtacctcctcactggcattcctagcagtccggtccaagagactaat
cccccagcacagcttcctgcatctgcccgcccaggcacagagacccctactgtagctgag
ggggagaaccctctggagttcttgcgttcccagcctcagttccagagcatgaggcaggtg
atccagcagaacccctcactgctgccagctctgctccaacagctgggccgggagaaccca
cagctcctacagcaaatcagccagtaccaggagctgttcatccagatgctgaatgagcca
gcgggggaggtaggagacgtgcctgaggtgggggacctgggtgctgcagtggaggaggga
gctccagtcaactacatccaggtcactcctcaggagaaggaagccatcgagaggttaaaa
gcgttgggtttccctgaggcgctggtgatccaggcctactttgcctgtgaaaagaatgag
aacctagcggccaacttcctcctgaaccagggctttgaggatgaatga
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integrated database retrieval system
