Coregonus clupeaformis (lake whitefish): 121569580
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Entry
121569580 CDS
T08357
Name
(RefSeq) signal transducer and activator of transcription 5B isoform X1
KO
K11224
signal transducer and activator of transcription 5B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04012
ErbB signaling pathway
cclu04081
Hormone signaling
cclu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121569580
09133 Signaling molecules and interaction
04081 Hormone signaling
121569580
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121569580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121569580
Transcription factors [BR:
cclu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
121569580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STAT_bind
STAT_alpha
STAT_linker
STAT_int
SH2
STATa_Ig
DLP_helical
Prominin
Motif
Other DBs
NCBI-GeneID:
121569580
NCBI-ProteinID:
XP_041736604
LinkDB
All DBs
Position
30:complement(52687001..52769061)
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AA seq
776 aa
AA seq
DB search
MVARPEDKRLCKMAVWIQAQQLQGDALHQMQSLYGQHFPIEVRHYLSQWLEGQLWDVIDL
ENPQEEFKAKRLLDSLIQELQNKAEHQSTYDRCPLELVRCIKHILYTEQRLVREASNSSS
PVGGMMDSMSQKYQQINQVFEELRLLTQDTENDLRKLQHNQEYFIIQYQESLRIQAQLTS
LATLPPADRQLREPTLLSKRATVEAWLTREANTLQKYRLDLAEKHQKSLQLLRKQQTIIL
DDELIHWKRRQQLAGNGGPPEGGLDILQSWCEKLAETIWQNRQQIRRAEHLRQQLPIPGP
IEELLNDLNSTITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKLNVHMNPPQ
VKATIISEQQAKALLKNENTRNDSSGEILNNNCVMEYHQATGTLSANFRNMSLKRIKRSD
RRGAESVTEEKFTILFESQFSVGGNELVFQVKTLSLPVVVIVHGSQDNNATATVLWDNAF
AEPGRVPFIVPDKVLWPQLCETLNMKYKAEVQSNRGLSEENLVFLAQKAFSSSSINPDDY
RGMTMTWSQFNRESLPGRNFTFWQWFDGVMELTKKHLKPHWNDGAILGFVNKQQAQDMLM
SKPNGTFLLRFSDSEIGGITIAWVAENPNKPGERMVWNLMPYTTKDFSIRSLADRISDLN
HLLFLYPDRPKDEVFSKYYTPPLSKAVDGYVKPQIKQVVPEFTTANLDPAANPTYMDHGA
SPTVSHPQTYGIYPPMSDSMLDADGDFDLDDTMDVARHVEELLRRPMESQWSGQQS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaagacctgaagacaagaggttgtgcaagatggcagtgtggatccaggcccag
cagctccagggggatgcgctgcaccagatgcagtctctctatggacagcacttccccatc
gaggtgcgccactacctgtcccagtggcttgagggccaactctgggatgtgatcgatcta
gagaacccccaggaggagtttaaggccaagcgtctgctggacagcctgatccaggagctg
cagaacaaggctgagcatcagagcacgtatgaccgctgtcctctggagctggtgagatgc
atcaaacacatcctgtacacggagcagaggctagttcgagaggcctctaattcgagctcc
ccagtgggcgggatgatggacagcatgtcccagaagtaccagcagatcaaccaggtgttc
gaggagctgcgtctgctgacccaggacacagagaacgacctgagaaagctccagcacaac
caggagtacttcatcatccagtaccaggagagcctccgcatccaggcccagttgaccagc
ctggccacactgccccctgctgacagacagctgagggagcccaccttactgagcaagaga
gccaccgtggaggcctggctcacccgggaggccaacacactacagaaatacagactggac
ctggcagagaagcaccagaagagcctacagctgctgaggaagcagcagaccatcatcctg
gatgacgagctgatccactggaagagacggcaacagctggccggcaacgggggtcctccg
gagggggggctggacatcctgcagtcctggtgtgagaagttggcagagactatctggcag
aacaggcagcagatcaggagagcagaacacctgagacaacagctgcccatccctggcccc
atcgaagagctactgaacgacctcaacagcaccatcacagacatcatctcagcactggtc
accagcacctttatcatagagaagcagcctccccaggtgctgaagacccagaccaagttt
gccgccacagtgcgcctcctagtgggcgggaagctcaatgtgcacatgaaccccccgcag
gtcaaggccaccatcattagtgaacagcaggccaaggccctgctcaagaacgagaacacc
aggaatgacagcagtggagagatccttaacaacaactgtgtgatggagtaccaccaggcc
acaggaacactcagcgccaacttcaggaacatgtctttgaagaggatcaagcgctcggac
cggcgaggggcagagtctgtgacagaggagaagtttaccattctgtttgagtcccagttc
agcgtcgggggtaatgagctggtctttcaggttaagacgttatcacttcctgtggtagtg
atcgtccacggtagccaagacaataacgccacggcaacggtgctatgggacaacgctttt
gccgaaccgggtcgggtgcccttcatagtgcctgacaaggtgctgtggccccagctgtgt
gagaccctcaacatgaagtacaaggcggaggtgcagagtaaccgtggactctcagaggag
aacctggtcttcctggcccagaaagccttcagtagctccagcatcaaccctgatgactac
cgcggcatgaccatgacctggtcccagttcaacagggagagtctgcctggcaggaatttc
acgttctggcagtggtttgatggggtcatggaactcacgaaaaaacatctcaaaccacac
tggaatgatggggcgatactgggctttgtgaacaagcagcaggcccaggacatgttgatg
tccaaacccaacgggaccttcctgctccgcttcagcgactctgagatcggagggatcacc
atcgcctgggtggctgagaatcccaacaaaccaggggagaggatggtgtggaacctcatg
ccctacacaaccaaagacttctccatccgctctctggctgaccgcatcagtgacctcaac
cacctcctgttcctctacccagacagacccaaggatgaggtcttttccaaatactacaca
ccacccctgtccaaagcagtggatggatacgtgaaaccgcagatcaaacaagtggtacca
gagttcaccacggccaatcttgacccagcagcaaaccccacctacatggatcacggagcc
tcccctactgtcagtcaccctcaaacctacggcatatacccacctatgagtgactccatg
ttagatgcggacggtgactttgacttggatgacaccatggacgtggcgcgacacgttgag
gagctgctgcggcgaccgatggagagccaatggagcggccagcagtcgtga
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