Coregonus clupeaformis (lake whitefish): 121569597
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Entry
121569597 CDS
T08357
Name
(RefSeq) F-box/LRR-repeat protein 20
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569597
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121569597
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_4
LRR_6
F-box-like
F-box
LRR_At5g56370
LRR_RPS2
LRR_8
LRR_EndoS
F-box_4
Motif
Other DBs
NCBI-GeneID:
121569597
NCBI-ProteinID:
XP_041736622
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Position
30:51939211..51954833
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AA seq
436 aa
AA seq
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MGKEVNGVSRSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLAL
DGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFSQNCRNIE
LLSLNGCTKITDSTCNSLSKFCPKLKHLDLASCTSITNLSLKALSEGCPLLEQLNISWCD
QVTKDGIQALVRCCPGLKGLFLKGCTQLEDEALKHIGAHCPELVTLNLQTCSQITDEGLI
TICRGCHHLQSLCVSGCANITDAILHALGLNCPRLRILEVARCSQLTDVGFTTLARNCHE
LEKMDLEECVQITDGTLIQLSIHCPCLQVLSLSHCELITDDGIRHLGSGPCAHDRLEVIE
LDNCPLITDASLEHLKSCHSLDRIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTPPP
SVGGSRQRFCRCCILL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaggttaatggtgtttcgcggagccggtttgagatgttctcaaacagcgac
gaggccgtcatcaataagaagctgcccaaggagctgttgctacgaatcttctcctttctg
gatgtggtgacactctgtcgctgtgcccaggtctcacggtcgtggaatgtgctcgccctg
gacggcagtaattggcagaggatcgaccttttcgactttcagagagatattgaggggcga
gtggtggagaacatctcaaaacgatgtgggggattcctgaggaagctgagtctgaggggc
tgtctgggggtcggggacagcgctctgagaaccttctcccagaactgcaggaatattgag
ctgcttagtttgaatggctgcaccaagattactgacagcacatgtaatagcctcagtaag
ttctgtcccaagctcaagcacttggaccttgcctcctgtacctcaatcaccaacctgtca
ctcaaagcacttagtgagggctgtcctctgttagagcagctcaacatctcgtggtgtgac
caggtgactaaggatggcatccaggccttggtacgatgctgccctggactcaaaggcctt
ttcctcaagggctgcacacagttggaggatgaagcactgaagcacattggggcacactgt
ccagagctggtcactctcaacttgcagacgtgttcgcagatcacagacgaaggtctcatt
actatatgccggggctgtcaccatctgcagtccctgtgtgtctcaggttgtgccaacatc
acagacgccatcctccacgccctgggactgaactgcccccgcctcagaatattagaggtg
gctcgctgctctcagctcacagatgtgggcttcactacgctagcaaggaattgtcatgag
ctggaaaagatggacctggaagagtgtgtgcagatcacggacggcacacttatccagttg
tccatccactgcccttgtctgcaagttctgagcctatctcactgtgagctgattactgac
gatggcatcagacatctgggcagcgggccctgtgcccacgaccggctggaggtgatcgag
ctggacaactgccccctgatcacggacgcctcgctggagcatctgaagagctgccacagc
ctggaccgcatcgagctctacgactgccagcagatcacccgcgcaggcatcaagagacta
aggacccatctgcctaacatcaaagtgcacgcgtatttcgcccccgtcaccccacccccc
tcagtcggggggagtcgccagagattctgtcgctgctgtatcctgctatga
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