Coregonus clupeaformis (lake whitefish): 121569619
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Entry
121569619 CDS
T08357
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121569619
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121569619
04261 Adrenergic signaling in cardiomyocytes
121569619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121569619
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121569619
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
121569619
NCBI-ProteinID:
XP_041736660
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Position
35:18090454..18141347
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AA seq
525 aa
AA seq
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MVQKSSMSRTPSTSTQEIQMDMFDQHPHAQGKYSKRKSRFKRSDGSTSSDTTSNSFVRQG
SADSYTSRPSDSDVSLEEDPEALRKEADLQALATLEKAKTKPVAFAVRTNVGYNSGPNDD
IPVQGMAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENTRLLQEQKMRQ
NRLSSSKSGGSSSLDVATGTRRPTPPGTAHVDMSTMAFDLDPLDLDAEEPPESQGDPRSP
KGSAGSVTSPQGQIHRLPFFKKMEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFD
FLKHKFEGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLDVLAEVQSEIERIFE
LARTLQLVALDADTINHPSQLAKTSLAPIIVYIKIASPKVLQRLIKSRGKSQAKHLNVQM
VAADKLAQCPPELFDIILDENQLEDACEHLADYLEAYWKATHPPSSNPPNPLLNRTMATA
ALAASPEPVSNLQVQVLTSLRRNLEFWPGLEGPGAEDGKVAEHAL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaaaagtagtatgtccaggacgccttcgacctcaacccaggagatccaaatg
gacatgtttgatcaacatccacacgcacagggaaagtattccaagcggaagagccgcttc
aagcgctccgatggaagcacctcctctgacaccacctccaacagctttgttcggcagggc
tctgctgactcctacaccagccggccgtcagactcagatgtgtccctggaggaggaccca
gaggcgctgaggaaggaggcagacctacaggccctcgccaccctcgagaaagccaagacc
aaaccagtggccttcgctgtgcggacgaatgtgggctacaactctgggcccaacgatgac
atcccggtgcagggcatggccatctcctttgaagctaaagacttcctacacatcaaagag
aagtacaataatgactggtggattgggcgactggtgaaggagggctgtgaggtggggttc
atccccagcccagtcaaactggagaacacccggctactgcaggagcagaagatgagacag
aaccgcctcagctccagtaaatctggtggcagctccagcctggacgttgccacgggaaca
cgcaggcccacccctcctggcacagctcatgtggacatgtccacgatggcttttgacctt
gaccccctggacctggatgccgaggagccccctgagtcccagggtgaccctcgctccccc
aagggcagcgcaggcagcgtcacctctccccagggccaaatccaccgcctgcccttcttt
aagaagatggagcatgttcccccttacgatgtggtcccctccatgagacccatcattcta
gtggggccgtcactcaagggctacgaggtgactgacatgatgcaaaaggctctctttgac
tttctcaagcacaagtttgagggcaggatatccatcactcgggtgacagcagacatctcc
ctggccaagcgctcggtcctcaacaaccccagtaaacacaccatcatcgagcgctccagc
acccgctccagcctggacgtactggcggaggtgcagagtgagattgagcgtatctttgag
ctggcccgcaccctgcagctggttgccctagacgcagacaccatcaaccacccctctcag
ctggctaagacctccctggctcccatcatcgtctacatcaaaatagcctcacctaaggtc
ctccagaggctcattaaatcccgggggaagtcccaggccaaacacctgaacgtgcagatg
gtggcagcagacaaactggcccagtgcccccctgagctgtttgacatcatcctggatgag
aaccagctggaggacgcctgtgagcacctggctgactacctggaggcatactggaaggcc
acgcacccccccagcagcaaccccccgaaccccctgctcaaccgcaccatggccacggcc
gccctggccgcctccccagagcccgtctccaacctgcaggtacaggtgctcacctccctg
cgccgcaacctggagttctggcccggcctggagggccccggggccgaggatgggaaggtg
gccgagcacgccctctaa
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