Coregonus clupeaformis (lake whitefish): 121569671
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Entry
121569671 CDS
T08357
Symbol
hoxb3a
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-B3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121569671 (hoxb3a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121569671 (hoxb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
121569671
NCBI-ProteinID:
XP_045067013
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All DBs
Position
35:complement(38417461..38420994)
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AA seq
418 aa
AA seq
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MQKTTYYDNSTLFGGYSYQGANGFGYDAPQPAFQSAAHLEGDYQRSACSLQSLGGNSAPP
QQHAKTKELNGSCMRPSLPPEHQPPPQVSPPVNPANATSSSATATSSSATAQQPGGSGGA
AKLAPKTYTLSTNPTLNKQIFPWMKESRQNIKQKNSSPSASSANAESSGGEKSPPGSAAS
KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQK
CKGLGSSSGGPSPTGSPPLPMQSSAGFMNSMHSMAGNYDAPSPPSFNKSHQNAYAMSSAY
QNPMKSCXLPTKYANTAPEYDPHGLQGNSGNYGTPNMQGSPVYVGGNYVESMPTSGPSMY
GLNHLPHHQAGNMDYNGATQMSASQHHGPCDPHPTYTELAAHHPSQGRIQEAPKLTHL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacgacctactacgacaactcgacgcttttcggaggttactcgtaccaaggg
gccaacggcttcggctatgatgctcctcaacccgccttccagtccgcggctcacctcgaa
ggcgactaccagaggtccgcctgctcgctgcagtccctcggtggcaacagcgcccctccc
cagcagcatgccaagacgaaagagctgaatggcagctgcatgcggcccagcctgccacct
gaacaccaaccacccccccaggtgtctccacccgtcaaccccgccaacgccaccagcagc
agtgccaccgccaccagcagcagtgccaccgcgcagcagccgggaggcagcggtggggcc
gccaaattagcgcccaagacgtacactctgtccaccaaccccaccctcaacaagcagatc
ttcccctggatgaaagagtcgaggcagaatattaagcaaaaaaacagctctccaagcgca
agttcagctaacgcggagagcagcggaggtgaaaaaagccccccgggttccgcagcctcc
aagagagcgcgcactgcgtacacgagcgcgcagctggtggagctagaaaaggagttccat
ttcaaccgttacctgtgtaggcctcgccgcgtggaaatggccaacttgctcaacctcagc
gagcgccagatcaagatttggttccagaaccggcgtatgaagtacaaaaaggatcagaaa
tgtaaagggctgggctcgtcatcaggggggccctctccaaccggaagcccacccctaccc
atgcagtcctcagctggcttcatgaactcgatgcattcaatggcaggcaactacgacgcc
ccctccccgccatcttttaacaagtcccatcaaaacgcctatgccatgtcctcagcctac
caaaaccccatgaaaagctgcnccctcccaacaaagtatgccaacacagcaccggaatac
gacccgcacgggctacagggtaacagtggcaactatgggactcccaacatgcagggcagc
cccgtgtatgtgggaggaaactacgtggagtcgatgcccacctctgggccgtccatgtac
ggcctcaatcatctaccacaccaccaggctgggaacatggactacaacggtgccacgcag
atgtcagcaagccaacaccacggaccgtgcgacccccacccgacatacacggagctggca
gcgcaccatccttctcagggtagaatccaggaagcacccaagttaactcatctgtag
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