Coregonus clupeaformis (lake whitefish): 121569692
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Entry
121569692 CDS
T08357
Name
(RefSeq) uncharacterized protein LOC121569692 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121569692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121569692
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121569692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
121569692
NCBI-ProteinID:
XP_041736776
LinkDB
All DBs
Position
1:complement(49167127..49228333)
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AA seq
1814 aa
AA seq
DB search
MSQSGKILHLYVEVRSVPEEEGERKELGGGVEGMHPLVLQGPDILPQSQRTPSHSTSTSS
CTCTCPSTSTPSPASMSPGVLHKDGGSSPSLTSKSSSRHSVSFQLDLPDNSGPPTHHRQS
LPYKGIGQLLSTLQPAPNGPQHGTLVRGRSSDIEHYHGRVPLSPASSGRIMSPSTPTSGR
RSYDGSGVGDGGKCSVVSFSYIEKASIKSVDSPHSAVCQSVPENPFSRGMEERHMPAHLR
KRLSDPVWSDSWQPSGSSSTKLSCPTSGRSPRSSPCLRRATLDTVAREATYRAMEEFGSP
ELRRRLAAYSPDRSPSLPWHYQQQPRCQSCGGSPDLPRGAKTLPVNAHLIDSDRNRGLNG
LPRSPASHQLSVQARQSYYNYTMSPTSVSRHHGVQNHRLWLGDESPRLSSKCGDESPRLS
SKFGNESPRLSSKFGDESPRLSSKFGDESPRLSSKFGDESPRLSSKFGDESPRLSSKFGD
ESPRLSSKFGDESPRLSSKFGDESPRLSSKFGDESPRLSSKFRPPLPAGRPTAIQHEIPA
SMITSTSASCDQRASSHTSSHTPSDSPCLPNKVNSKQSGQSNDSKMGEGMNQTSDRRSIS
PATSPHMACKLAEEATKLSTIFMDRRTPSHTPSQADSTRSESPKPGYISRESQPYATLQG
QGSPAQPHPEPNTNTHLQDHRWTDKESPRAGPHYREYRPGQEPGQASPLLQQKDISSPAM
PATLHLVVASHTPIIDPRLQRAELLTKDSPTLHRHQPPQYMGDLGSPSLERRQYDTRFDR
GGPRDSPESSRRLVIGLDMEPPESWSSRMQQWRENGSVADREESIRENLTADGDEVYVVT
KEELQQRRDGTAVLGYQGYKHGVNREQRGETQDHSGALGSSQSSSGVTGSLGESSQPERD
CLSPETSSQSSQKSNDTEETASGMQSDSGSSVLGPSLHSQKIARAKWEFLFGQPIEDSHD
SKDYSQAPPSGTPSESPMPTPPSSLLLKPTGHRRVWDDEGQSLPYHDVQQVVELVTPLTI
AVVGFSPKTGIIRRAINYAETDLDAVPLKCYRETDLDEVILAEAEREQEEVDSAFGSNRS
VMGTSASSASTIVRTDGEEDELEEEEEEEEEVVSWASVRMQGDKKRQHATQEDNQVYSLL
LKGCTLDHISDAQSALKSPISVTSPRRTSVDSLDSFSRHFERIMESHRAKGTSYSSLDSV
DLLTSSCPPVFTFDLPTLTPEIQSQICENARHIIELSFAPLAHTELPSVSDPTCSENTLD
PTGEGLSSTSEQDYTSGGKSRLEKDCLRTKSNLDLPLIREKPGHWAPDPFTQQDVGERLA
LGSTEALANGNKADLQAAKRLAKRLFNLDGFRKSDVARHLSKNNEFSRMVAEEYLSYFNF
SGLTIDQALRAFLREFALMGETQERERVLAHFSRRYLQCNPNAMPSEDSVHTLTCALMLL
NTDLHGHNIGKKMSILQFIGNLEGLNDGKDFPKELLKALYNSIRNEKLQWTIDEEELRKS
FSELADLRTDSASHTMKRIGSSLGVAQNPDALIYKNGFLVRKVHADSDGKKTPRGKRGWK
TFYVMLKGLVLYLQKGEYRPDKQLSEEDLKNAVSIHHSLAMRAADYSKRPNVFYLRTADW
RVFLFQAPNAEQMQSWITRINVVSAMFSAPPFPAAIGSQKKFSRPLLPGSNTKLSQEEQV
KSHETRFRAISSELNELTAVIPDKKAKVCDLEEHKQREEYLEFEKTRYGTYAMLLRAKIR
SGEEDLSLFESRLFDNGGLQRAHSSPTLREEHSSSSQASSAKGGGSSSSSSTKGRSKTKR
SEPQRNSYRQAVKQ
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcaggcaagatcctgcacctgtatgtggaggtgaggtctgtcccggaggag
gagggggaaaggaaggagttgggtggtggtgtggaggggatgcacccactagtgctccaa
gggcctgacatcctacctcagtcccagcgcacccccagccactccacctccacctctagc
tgtacctgcacttgcccctctacctccacccccagcccagcctccatgtccccaggggtg
ttgcataaagatgggggcagcagtcccagcctcacctccaagtcctcctccagacactct
gtcagtttccagctggacctaccggacaactccggaccgcccacacaccacaggcagagt
ctgccttacaaggggattggtcagctgctctccactctccagcctgcacccaatgggccg
cagcatggcactctggtgcgtggccgctcctcagatattgagcactaccacgggagggtg
cccctatcccctgcctcctctgggagaataatgtccccctcgactccaaccagtgggcgc
aggtcctatgatggctctggtgtgggggacgggggcaagtgctctgtggtcagctttagc
tacatagagaaagccagcattaaatctgtggacagcccccacagtgctgtgtgccaaagt
gtacctgagaaccctttcagtagaggcatggaggagaggcatatgcctgcccaccttagg
aagaggctcagtgaccctgtgtggtcagacagctggcagccctccggtagctccagcacc
aaactgtcctgtcccacctcgggcaggtcccccaggagctccccttgtctccgcagggcc
actctggacactgtagccagagaggccacctacagggccatggaggaatttggctccccg
gaactgaggcgcagactggcagcctacagcccagacagaagcccaagcctgccttggcac
taccagcagcagccccgctgccagtcctgtggtgggtccccggacctgcctaggggagcc
aaaacactgccagtcaatgcacacctcatagactcagacaggaaccgtggtttgaatggc
ctccccagaagcccagcttctcaccagctctctgttcaagccaggcagtcctactacaac
tacaccatgtcccctaccagtgttagccgccaccatggtgtccagaaccacaggctgtgg
ctaggggacgagagtcctaggttgtcctcaaaatgtggggacgagagtcccaggttgtcc
tccaagtttgggaacgagagtcccaggttgtcctccaagtttggggacgagagtcccagg
ttgtcctccaagtttggggacgagagccccaggttgtcctccaagtttggggacgagagc
cccaggttgtcctccaagtttggggacgagagtcccaggttgtcttccaagtttggggat
gagagccccaggttgtcttccaagtttggggacgagagtcccaggttgtcttccaagttt
ggggatgagagccccaggttgtcttccaagtttggggatgagagccccaggttgtcctcc
aagtttcgcccacctttacctgcaggcaggcccactgcaattcagcatgaaataccagca
agcatgattaccagcacttcagcctcttgcgaccagagggctagcagccacaccagcagc
cacactcctagcgatagtccctgcttacccaacaaggtcaactccaaacagtcaggtcag
tcaaatgacagcaagatgggagagggaatgaaccagacgagtgacagaagaagtatctcc
ccggccactagccctcacatggcctgtaagctggcggaggaggctaccaagttgtccacc
atcttcatggacaggaggactccctcccacaccccgtcccaggctgactccaccaggtca
gagagccccaagcctggctacatctccagggagtctcaaccctacgccaccctccagggc
cagggttctccagcacagccccaccctgaacctaacaccaacacacacctacaggaccat
aggtggacagacaaggagtctcctagagctggaccccactacagagagtacagaccaggt
caagaaccggggcaagcctcccccctcctacagcagaaggatatctcctcccctgctatg
ccagcaacactgcacctagtggtggcgtcccacacccctatcatagaccctcggctgcag
agagctgagctgctgacgaaagacagcccaaccctgcaccgccaccagcccccgcagtac
atgggagacctgggctcccccagcctggagaggagacagtatgacacccgcttcgataga
gggggtccgagggacagcccggagagcagcaggcgcctggttataggactcgacatggag
ccaccagagagctggagctccaggatgcagcagtggagggagaatgggtccgttgcggac
agggaggagtccattagagagaatctgactgctgatggtgatgaagtgtatgtggtgacc
aaggaggagctacagcagaggagggatggaacagctgtgttggggtatcaggggtataaa
catggggtaaacagggagcagaggggggagacccaggaccatagcggggcactggggtct
tcccaaagctccagtggagtgacaggcagtctgggggagagcagtcagccagagagggac
tgtctctctccagagacatccagccagtccagccagaagagcaatgacactgaagagact
gcttctgggatgcagtcggacagcggttcctctgtgctgggcccgtccttgcactcccag
aagattgcccgtgccaaatgggagttcctgttcggacagcccatagaggacagccatgat
tctaaagactactctcaagccccccctagtggcacccccagtgagtctcccatgcccacc
cctccctcctccctgctcctgaagcccacaggtcacaggagggtgtgggacgatgagggt
cagagtttaccctatcacgatgtccagcaggtggtggagttggtgactccgctcacgatc
gctgtggttggattctcgcccaagacgggcatcatccggagagccatcaactacgctgag
acggacttagacgcagtgcccctgaaatgctatagggaaacagatctagatgaggtgata
ttggctgaggcagagcgagagcaggaggaggtggactctgcctttgggagtaaccgcagc
gtgatgggcacctctgcctccagcgccagtaccatagtacgcactgatggagaggaggat
gagctggaggaggaggaggaggaggaggaggaggtggtgagctgggccagtgtgaggatg
cagggggataagaagagacagcatgccacccaggaggataatcaggtgtacagtctgctg
ctgaagggttgtaccctggaccacatatcagatgcccaatcagccctgaagtcccccatc
tcagtgaccagccctcgcaggacctcagtggacagcctagactccttcagccgccacttc
gagaggatcatggagtctcaccgagccaagggcacctcttacagcagcctggacagcgtt
gacctcttgacctccagctgcccgcccgtattcacctttgacctacccaccctcacccct
gagatccagagccagatttgtgagaatgcgcgtcatatcatcgagctgagttttgccccc
ctggcccatacagagctccccagtgtgtctgaccccacctgctctgagaacaccctggac
cccacaggagaggggctcagcagcacctctgagcaggattatacttcaggagggaagtcc
cggttggagaaagactgcttgcgaactaagtctaatttagacttgcctctcatcagggag
aagccaggccactgggctccagatccgttcacacagcaggacgtgggcgagcgcttggcc
ttgggcagcacagaggccctggccaacggcaacaaggctgacctgcaggccgccaagcgc
ctggccaaacggctcttcaacctggatggcttcaggaagtctgacgtggccaggcacctt
agcaagaataatgaattcagtcggatggtggcagaagaatacctcagttacttcaacttt
tcaggccttactattgaccaagcactacgagccttcctgagggagtttgccctcatggga
gagacacaagagagagagcgagtgctggcccacttctctaggcgatatctacaatgcaac
cccaatgcaatgccttctgaagacagtgtccacactctgacctgtgccctgatgctgctc
aacacagacctgcatggccacaatatcggtaagaaaatgtccatcctgcagttcatcggc
aacctggaagggctaaacgacggaaaggattttcccaaagaactgctcaaggccttgtac
aactctatcagaaacgagaagctccagtggaccatcgatgaggaggagttgcgcaagtcc
ttctccgagttggccgatttgcgcactgactccgcctcccacaccatgaagcgaatcggc
agtagtctaggcgtggcccagaatcctgacgccctgatctataagaacggcttcctggta
cggaaggtccacgcagactctgacggcaagaaaacccctcgaggtaagagaggatggaag
acattttatgtcatgctgaagggactggtcctttacctgcagaagggagagtaccgtcca
gataagcagctgtctgaagaggatctgaagaacgctgtgtccatccaccactctctggcc
atgagggcagcagactacagcaagaggcccaacgtcttctacctgcgcactgcagattgg
agagtgttcctcttccaagcacctaatgcagagcagatgcagtcgtggatcacccgtatc
aacgtggtgtcagccatgttctcagcgccacccttccctgcagccatcggctcccagaag
aaattcagccgcccgctgctgccaggctccaacaccaagctgtctcaggaagagcaggtg
aaatcccatgagacacgtttccgggccatctcctctgagctgaatgagttaaccgctgta
attccagacaaaaaggccaaagtgtgtgatctggaggagcacaagcaacgtgaggagtac
ctggagtttgagaaaactcgctacggtacgtacgccatgctactgagggctaagatccgg
agtggggaagaggacctgtctctattcgagtcgcgtctctttgacaacgggggtctccag
agggcccactccagccccactctgcgggaggaacacagcagcagcagccaggccagcagt
gctaagggtgggggcagcagcagtagttccagcaccaaggggagaagcaagaccaagcgc
tctgagccccagagaaacagctacagacaggctgtcaaacagtga
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