Coregonus clupeaformis (lake whitefish): 121569695
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Entry
121569695 CDS
T08357
Name
(RefSeq) integrin alpha-3
KO
K06482
integrin alpha 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
cclu04810
Regulation of actin cytoskeleton
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121569695
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121569695
09142 Cell motility
04820 Cytoskeleton in muscle cells
121569695
04810 Regulation of actin cytoskeleton
121569695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121569695
04515 Cell adhesion molecules [BR:
cclu04515
]
121569695
04090 CD molecules [BR:
cclu04090
]
121569695
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121569695
Cell adhesion molecules [BR:
cclu04515
]
Integrins
Integrin alpha subunits
121569695
CD molecules [BR:
cclu04090
]
Proteins
121569695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Collectrin
Motif
Other DBs
NCBI-GeneID:
121569695
NCBI-ProteinID:
XP_041736775
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MAIFQLLRFSTNTYYLLLLVLLCTVHILQGFNLDVRFPVVKEGKTPGSLFGFSVALHKQM
VGEKRYLLLVGAPKEKAESGVKASETGDVYTCPVNVAQSDCTRMNLIGSDPDLIEGEDRV
EDMWLGVTVASQRQPGGRILTCGHRFVKLYGVLKLRQMIGKCYIRGNDLNYNETDMHWQN
PDQVCSHTKDITGEVMCNMGISAAITDTEVIVGAPGSFEWQGNVHVSWMNPKVIYDTKRS
SFPNFNNRRHIYIGYSVAEGRGLLSQDQDTVVTGAPKDNKDDAKGSVILTVKKMSASGDR
DQLKPYLTLRGEQMGSYFGNSLAVADLNNDGWNDLIIGAPFYFDRKKELGGAVYVYMNEN
GSFRQRSSIILRGPRDSAFGMAVAAIGDVNQDGFQDFAVGAPFHGTGRVLIWTGSAQGIS
QEPSQVIEGEDIAGGGFKTFGYSINGGLDVDGNRYPDMVVGSLDDRVALLRARPVIHLIK
TLEVTPEIVDPKDCDNCVEVEVCFSYTLSTGDKDFRKNVTVKYTVEADLTRHNHRVRFQD
NGQDSYTGFLSMPSAKCKTLRLGLVSPIRDKVEPVVFSLNVSLHEGHPKARQSLQSLDAF
PVLSEGKASHVKKEIHFQKACGLDNKCQSNLQMKAEFAKTNEEQTPFPSHDGHQVLQYSA
SVKKVLLVVDVTNFQSPGQPAEDAHNAMLNVTIPPSLIYSGVRSKSNNPVIECSAEDMVL
LCELGNPFTSNQRAQVLITFETSKINLDTREIRSTLQLSTLSKQSNLQPLPLLMVVEYTL
KTSFELAQYTGHTHFSGEVMGESGMKTASDVGSPVEFTFKVNVLGKPLGNLGNLEVEFDW
PWEVANGKWLLYLMEIQTKGTSDSHCVPPGDIVNPLNLTLPESKARRRRRREEGSTEEVH
PREPKASINLKGTRKKSFKLDCVTGTAHCVKFICPLHNMNNTATIIVRARVWNSTMLEDY
REAWRVTVNGKATLKLVTDKPTIRMNTESTEFTLDIDPELGEEAPYQVPLWIIIVSAVAG
VLLLAFIILLMWKCGFFRRASTREMYEAKAQKAEMKTQPSEVERLTEE
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggctatctttcaacttctccggttctctacgaatacctactacctcctgttgcttgtc
ctgttgtgcacagtacatattcttcaagggttcaacctggacgtgcggttccctgtcgtc
aaggaaggaaagaccccgggaagtctctttggcttctcggtggcacttcacaaacagatg
gtgggagagaaaagatacctactccttgttggagcgcccaaggagaaggcagagtccggc
gtgaaggccagtgaaacaggagatgtgtatacctgccctgtaaatgttgcccaatcagat
tgcaccaggatgaacctgattggctcagaccctgacctcattgagggtgaggacagagtt
gaggatatgtggctgggggtgactgtggccagccagagacagccaggggggcgaattctg
acctgtggccatcgctttgtgaagttatacggcgtattgaagctgcgtcagatgattggg
aagtgttatatccgtggtaacgacctgaactataatgaaacagacatgcactggcagaac
cctgatcaggtgtgcagccacactaaagacatcacaggcgaggtcatgtgcaacatgggc
atctctgctgcaatcactgacacagaggtcatcgtgggcgcccctggcagctttgagtgg
caaggcaatgttcatgtctcctggatgaacccaaaggtcatctatgacaccaagagaagc
agcttccccaactttaataatcgacggcacatttacataggctactcggtggcagagggc
cgaggcctcctcagccaggaccaggacacagtggtgacaggggctcctaaggataacaag
gatgatgccaaaggctcggtcattctgactgtgaagaagatgtcggcttcaggggacagg
gaccagctgaaaccctacctcaccctgcgaggcgagcagatggggtcctactttgggaac
tccctagccgtggcagacctcaacaatgatggttggaatgatctgatcattggagccccg
ttctattttgatcggaagaaggagcttggtggagcggtgtacgtctatatgaacgagaac
ggctccttccggcagcgctccagcatcatactccgaggccctagagactctgcgtttgga
atggctgtggctgccattggagatgtcaatcaagatggctttcaagattttgcggtgggt
gctccgttccatggaacaggcagggtgttaatctggacaggcagtgctcagggcatctct
caggagcccagtcaggtgattgagggggaggatatagctggaggtgggttcaagacgttt
ggctactccatcaacggagggctggatgtggatgggaaccgctaccccgacatggtggtc
ggctcactggacgaccgcgtagccttactgagggctcgcccagtcattcacctcatcaaa
actcttgaagtgacgccagagattgtggaccctaaagactgcgacaactgtgtggaggtg
gaggtctgtttctcctacacactgagtactggggacaaggacttcaggaagaacgtcact
gtgaagtacactgtggaagccgacctgactcggcacaaccaccgggtccgtttccaagac
aacggccaggacagctacactggcttcttgtcaatgccatctgccaaatgcaaaacgctg
aggctcggactagtgagtcccattcgagacaaggtggagcccgtagtcttctccctaaac
gtgtctctccatgaggggcatcccaaagcccggcagtccctgcagagcctggatgccttc
cctgtgctaagtgagggaaaggccagccatgtcaaaaaggagattcacttccagaaggcc
tgtggcctggacaataagtgccagagtaacctgcagatgaaggcagagtttgccaaaacc
aatgaagagcagacacctttccccagccatgacggtcaccaggtcctccagtacagcgcc
agtgtcaagaaggtcctgttggtcgtggatgtgaccaacttccagtcgccagggcaaccg
gcggaggacgctcacaacgccatgctcaatgtcaccattcccccgtcgctgatctactct
ggcgttcgctcaaagagcaacaacccagtcattgagtgttcagcagaggacatggttcta
ctgtgtgagctggggaaccctttcaccagcaaccagagggctcaggtcctgatcaccttt
gagacgtctaagatcaatctggacaccagagagatccggtctacactgcagctctccaca
ttgagtaaacagagcaatctacaaccgctgcctcttctcatggtggtggagtatacacta
aagacgtcttttgaacttgcccagtacacaggtcacactcacttcagtggggaggtcatg
ggagaatcgggcatgaagactgccagcgacgtcggaagtcctgtggagttcacatttaag
gtgaatgttcttgggaagccactgggtaaccttggaaacctggaggtggagtttgattgg
ccctgggaggtagccaatggcaagtggctgctgtacctgatggagatccagaccaaaggg
acgtcagactctcactgtgtgcctcctggagacatcgtcaacccactcaacctcacgtta
ccagagagcaaagccaggaggaggagaaggcgagaggagggctccacagaggaggtgcac
ccaagagaacccaaggcttccatcaatctgaagggaactcgcaagaagtcctttaaactg
gactgtgtcacgggcactgctcactgtgtgaaattcatctgccctctccacaacatgaac
aacactgcaacaataattgtcagggccagagtgtggaacagcaccatgctggaggactac
agggaagcgtggcgggtgacagtgaatggcaaggccacactgaaactggtcacagacaaa
cccaccatcaggatgaacactgagagcacagagttcaccctggatatagacccagagctg
ggggaggaggctccgtaccaggtccccctgtggatcatcattgtgtctgctgtcgctggg
gtcctccttctggccttcatcatcctcctcatgtggaagtgtggcttcttcaggagggcc
agcaccagggagatgtacgaagccaaggcccagaaagctgagatgaagacccagccgtcg
gaggtggagaggctgactgaagagtag
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integrated database retrieval system