Coregonus clupeaformis (lake whitefish): 121569717
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Entry
121569717 CDS
T08357
Name
(RefSeq) cell division cycle protein 27 homolog isoform X1
KO
K03350
anaphase-promoting complex subunit 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
cclu04114
Oocyte meiosis
cclu04120
Ubiquitin mediated proteolysis
cclu04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121569717
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121569717
04114 Oocyte meiosis
121569717
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
121569717
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121569717
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569717
03036 Chromosome and associated proteins [BR:
cclu03036
]
121569717
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
121569717
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
121569717
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
121569717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ANAPC3
TPR_8
TPR_12
TPR_11
TPR_17
TPR_19
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_9
ARM_TT21_N
TPR_Slam
TPR-S
ARM_TT21_C
ChAPs
PPTA
TPR_10
TPR_NPHP3
ARM_TT21_2nd
TPR_20
Csm6_6H
Motif
Other DBs
NCBI-GeneID:
121569717
NCBI-ProteinID:
XP_041736799
LinkDB
All DBs
Position
7:complement(30131950..30151876)
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AA seq
834 aa
AA seq
DB search
MTVLQEPVQAAVWHALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRL
LKGHSCTTPQCKYLLAKCCVELSKLAEGEQILTGGVLNKQKSQEDIVTEFGDSACFTLSL
LGQIYCKTDRLAKGSECYQKSLSMNPFLWSPFESLCQIGDRPDPEQIFRLTSLQCFSGGS
GAPPLFPISPAHTPSHNMPHRQVDTVLMETPQDTLELNRLNLESSNSKYSSLNTDSTMSY
IDSSVISPDTVGPLGTGGSLLSKQVQNKPKSGRSLLGGPAALSPLTPSFGILPLEPSPGD
PLYLQNYSHSGSGMDPPPPGVPPKKSVARISQAGTKSVFAQSGNSREVIPVPFNQTQTTA
PPQTSTTPQVLSPTIAAPPNVQPRRSSRLFTSASSTAKENSKKLKMKFPTKIPNRKTKSK
TGKGGITPSNLNESIEILKLDSSMTEGKVSMGSQFQAFSLQKAAADGLMMLMRDIGRGYL
ALCSYNCKEAISILSQLPSHHYNTGWVLGQIGRAHFELAEYMQAERIFSEVRRIESYRVE
GMEIYSTTLWHLQKDVALSALSKDLTDMDKNSPEAWCVAGNCFSLQREHDIAIKFFQRAI
QVNPGFAYAYTLLGHEFVLTEELEKALACFRNAIRVNTRHYNAWYGLGMIYYKQEKFNLA
EIHFKKALSINPQSSVLLCHIGVVQHALKKSDHALETLNRAINIDPKNPLCKFHRASILF
ANEKYKAALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANNQ
IKEAIDKRYLPDDEEPVTEDYPYDSAAEVEESQESSMTDADDTQLHTAESDEVL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgctgcaggaacctgttcaggctgctgtttggcatgcactaaaccactatgcc
taccgagatgctgtgttcctggccgagagactctatgctgaagtgcattctgaggaggcc
ctctttctgttagccacatgctactatcgttcgggaaaggcctacaaggcataccgcctt
ctcaagggacacagctgcacaacgccacaatgcaaatacctcctcgccaagtgctgtgtg
gaactgagcaagcttgcagagggagagcagatcctgacagggggggtcctgaacaagcag
aagagccaggaggacatcgtcacagagtttggagactctgcctgtttcacattgtccctg
ttggggcaaatctattgcaaaacagatcgtctggccaaaggttcggaatgttatcagaag
agcctgagcatgaatcctttcctgtggtctccctttgagtccctctgtcagatcggcgat
cgtccggacccggagcagatcttcagactgacgtccctgcagtgcttcagcggcgggagt
ggagcccctcccctgttccccatcagccccgcccacacgccaagccacaacatgccccac
cgccaggtggacacggtgctcatggagacgccccaggacaccttagaattaaacagactg
aacctggagtcttccaactccaagtactcgtctctgaacacagactccaccatgtcctac
atcgactcgtccgtcatctccccggacaccgtagggcctctggggacaggtggctccttg
ctatccaaacaagtgcagaacaaacccaagagtgggcgtagtctactggggggaccggca
gcactcagccccctcacacccagttttggaatcttgcccctggagcccagcccaggggac
cccttgtatctgcagaactactctcacagtggctcggggatggatccgccccctcccgga
gtcccaccaaagaagtctgtagcgagaatcagtcaggcggggacgaagtcggtgtttgca
cagagtggtaacagcagggaggtcatccctgtccctttcaaccagactcagaccactgcc
cccccacagaccagtactacgcctcaagtgctgagccccaccatcgctgctccccccaat
gtgcagcccaggcggagctccagactcttcaccagtgccagctctactgccaaggagaac
agcaagaagctgaaaatgaagttccccaccaaaatccccaaccggaagaccaagtcaaaa
acgggcaagggaggcatcaccccctccaacctgaacgagagcattgagatcctcaagctg
gactcgtccatgacagaggggaaagtcagtatgggctctcagttccaggccttcagtctg
cagaaggctgctgcagatggcctgatgatgctgatgcgagacatcggccgggggtacctg
gccctctgctcctacaactgtaaagaggccatcagcatcctgagccagctgccctcccat
cactacaacacagggtgggtcctgggacagatcggcagggcccactttgagctggccgaa
tacatgcaggcggagaggatcttctcggaggtgcggcgcatcgagagctaccgggtagag
ggcatggagatttactccaccaccctgtggcacttgcagaaggacgtggccctgtcggcc
ctgtccaaagacctcaccgacatggacaagaattcaccagaggcatggtgtgtggctggc
aactgtttcagtctgcagagggagcatgacatagccattaagttcttccagcgtgccatc
caggtgaacccgggatttgcctatgcctacacgttgctaggccacgagtttgtcctcaca
gaggagctggagaaggctctggcttgcttccgtaacgccattagagtcaacacacgccac
tacaatgcctggtatggcttggggatgatctactacaagcaggagaagttcaacctggca
gagattcacttcaagaaggcacttagcatcaaccctcagagctctgtgctcctctgccac
atcggagtggttcagcatgcactgaagaagtctgaccatgctttggaaaccctgaataga
gcgatcaacatagaccccaagaaccctctatgcaaattccacagggcctccatcctcttc
gctaatgaaaagtacaaggctgctctacaagagcttgaagagctgaaacaaatagtgccc
aaagagtcccttgtttactttttaataggaaaggtgtataagaagctgggccagacccac
ttggcattgatgaacttctcctgggccatggacctggatcccaaaggagccaataatcag
atcaaagaggccatagacaagaggtacctccctgacgacgaggagcctgtcactgaggac
tacccctatgactcagcagctgaggtggaggagtcgcaggagagcagtatgaccgacgca
gacgacacgcagctccacactgccgagagcgatgaggtcctgtaa
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