Coregonus clupeaformis (lake whitefish): 121569741
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Entry
121569741 CDS
T08357
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu00514
Other types of O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121569741
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121569741
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121569741
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
121569741
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
O-linked Gal type
121569741
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
DUF6492
Motif
Other DBs
NCBI-GeneID:
121569741
NCBI-ProteinID:
XP_041736833
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All DBs
Position
7:31833905..31858912
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AA seq
609 aa
AA seq
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MHRYMFLLSTALTLLFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGTI
ERLNYPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSAREMWADYFMVVDCDNLLTNPNVLWKLIKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKESSRQLAFHP
PHPDYSWAFDDIIVFAFSARMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEHIPAPRKIQDKLGFDEVFMINLKKRPDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEQFEERDLKAFSAEPL
LVFPTHYTGDAGYISDTETSVVWDNEKVRTDWDRARSGKTHEQAEISTEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtacatgttccttctgtccaccgccctgacgttactgttctccggaccagct
caaggatactttcccgaagagcgctggagcccggaatcgccacttcttgccccgcgggtc
ctcattgccctcgtctgccgcaactctgaacattctctgccttatttccttggaactatc
gaacgtctgaattatcccaaggaccgcgtggcaatttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaagctctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctacgcacacgtgatgaagctgcggcaggcagcactggactccgcg
agagagatgtgggcagactacttcatggtggtggactgtgataacctattgaccaatcct
aatgtgctgtggaagctcatcaaggagaacaagaccattgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
ccggcttacatccctatgagaaagcaggtgcgtaagggatgctttgcggttcccatggtg
cactccaccttcctgattgacctgaggaaggagtcgtcacgccagctggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtcttcgccttctccgctcgc
atggcagatgtgcagatgttcctatgtaacagagagacttatgggtatttccctgtgcca
ctacgagcccacaactccctgacagacgaagcagacagtttcctgcattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctcggagcacatcccggcccccagaaagata
caagacaaactgggctttgatgaggtgttcatgatcaacctaaagaaacggcccgaccgg
cgggatcgcatgctgaggactctgtatgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcaatgaacatcagtgaaatcaatgccctggggatccacatgctacca
ggctacagtgatccgtaccacggcaggcccctcaccaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatcgcagagcggggtctgaagagttccctggtgatc
gaggatgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcaggaagaggatgcaggtg
gaccgccctgagaagtctgtgcccaatatacacaacctggtggaggccgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctccctgtcatgttcaataaacaccctgtc
tcggactacatggagcagtttgaggagcgggacctgaaggccttctcggccgagccccta
ctagtgttccccactcactacacaggagacgcgggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
catgagcaggcggagatcagcaccgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
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