Coregonus clupeaformis (lake whitefish): 121569760
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Entry
121569760 CDS
T08357
Name
(RefSeq) nuclear receptor subfamily 5 group A member 2-like
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121569760
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121569760
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
121569760
Nuclear receptors [BR:
cclu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
121569760
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
TREH_N
Motif
Other DBs
NCBI-GeneID:
121569760
NCBI-ProteinID:
XP_041736871
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Position
7:complement(32304223..32318017)
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AA seq
540 aa
AA seq
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MNVPQGHHHADQCQDLRQAQPLDLLSSEGSLTSQELKTEPETRPDQAEGCPVCGDIVSGY
HYGLLTCESCKGFFKRSVQNNKRYTCVERQSCPMNPSQRKRCPYCRFQKCLAVGMKREAV
RADRMRGGRNKFGPLYRRDRQMKQQRWVYHHQQHNTTPYSIKLESAQTHQPSVSNIHLMS
SHTSAPLPSGNFHQSQAYPSNMGHSELPPMLLDCTMNRDRGALAPPLSLAYPGLYHRSFH
VGGSGYPQEKSEMMPYSYGPAPPTPPIPNGLLTPLTTPTTTPSSTPSSTAIQTSILTAPT
PSFLAQLLEGEPDESQVCAKVLASLQREQASRGKHDHLNTFSIMCKMADQTLFGLVEWAR
NSILFKELKVEDQMVLLQSCWSELLVLDHLCRQVAYSRESCIYLVTGQQIEVSNILTQAG
VTLTSLVSRTQDLVVKLKALHLDTQEFVCLKYLVLFNPDVKSVQDRRQVERTQERVNRTL
MDHTLYTHPGHSDKFGQLLLRLPEIRSISLQMEEYLYQRHLLGDLPCNSLLTEMLHAKHS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaccccagggccatcaccatgcggaccagtgccaggacctacgccaggcccag
cctctggatctgttgtcttcggagggatcgttaacatctcaggagctgaagacagagcca
gagaccaggccagatcaggctgagggctgtccagtctgtggagacatagtgtctggctac
cactatggactgctcacctgcgagagctgcaagggtttcttcaagcgttcggtgcagaac
aacaagcgttacacctgtgtagaaagacagagctgtcccatgaacccctcccagaggaaa
cgctgcccctactgccgctttcagaagtgcctggccgtgggcatgaagagagaggcggta
agggcagaccgaatgagaggtggccggaacaagtttggccctctgtatcgacgagacagg
cagatgaaacagcagagatgggtctaccaccaccagcagcacaacaccaccccctacagt
atcaaactggaaagtgcacaaacacaccagccttccgtttcaaacattcacctgatgtcc
agtcacacatcggcacccctgccctctggcaatttccaccaatcgcaggcctacccctcc
aatatgggccattcggagctcccccccatgcttctggactgcaccatgaaccgggacagg
ggggctctagctcctcctctgtccctggcttaccctggactgtaccaccgttccttccat
gtagggggatcaggatacccccaggagaaaagtgagatgatgccttacagctacggccca
gcacctccaaccccgcccatacctaacgggttactcaccccactcaccacgcccacaacc
accccgagctccactccaagctccaccgcgatccaaacctccatattgactgctcccaca
cctagcttcctggcccagcttctggagggtgagccagatgagagccaggtgtgtgccaag
gtgctggccagcctacagagagagcaggcaagccgcgggaaacacgaccacctcaacacc
ttcagtatcatgtgtaaaatggctgaccagactctgttcgggcttgtggaatgggccagg
aacagtattctcttcaaggagctcaaggtggaggaccagatggtgctgctgcagagctgt
tggagtgagctgctggtgctggatcacctgtgtcgacaggtggcctacagcagagaaagc
tgcatctatctggtcacaggacaacagattgaggtgtcgaacatcctgacccaggcaggg
gtcactttgaccagtctggtgtcaaggactcaggacctggtggtcaaactcaaggccctc
cacctggacacacaggagtttgtgtgcctcaaatacctggtcctcttcaaccctgacgtg
aagtcggtgcaggaccgccggcaggtggagcggacccaggaaagggtgaaccgcaccctg
atggaccacaccctctacacccacccgggtcactccgacaagtttggccaactgctgcta
cggcttcctgagattcgcagcatcagcctgcagatggaggagtatctgtaccagcgccac
ctactgggcgatctgccctgcaactcattgctcacagagatgctgcacgctaaacacagc
tga
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