Coregonus clupeaformis (lake whitefish): 121569824
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Entry
121569824 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF152-like
KO
K15705
E3 ubiquitin-protein ligase RNF152 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121569824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569824
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121569824
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121569824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF152_C
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-C3HC4_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
121569824
NCBI-ProteinID:
XP_041736976
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All DBs
Position
7:59648765..59770903
Genome browser
AA seq
213 aa
AA seq
DB search
METLSLSQDSILECQICFNYYSPRRRPKLLDCRHTCCSVCLTQMRSSQKEIRCPWCRGVT
KLPAGFSVSQLPDDPDIITVIAIPHASEHTPVFIRLPSNGCYMLPLPVAKERALLPGELG
CRFLPGGSGQQKVDVAVVAMPELQPLGLGMSLNGLEETERRGVGGGGGGGGKGSTWSGVC
TVILVACVLLFLLGIVLHNMSCISKRFTVISCG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggagactctgtctctctcgcaggactccatcttggagtgtcagatctgttttaactac
tacagcccgcggcggaggcccaagctgctggactgcagacacacgtgctgctccgtgtgc
ctgacccagatgagatccagccagaaagagatccgctgcccctggtgccgtggcgtcacc
aaactcccagctggcttttccgtctcccagctccccgacgaccccgacatcatcaccgtc
atcgccatcccgcacgcctccgagcacacgccggtctttatccgcctgcctagcaacggc
tgctacatgctgcccctgcctgtcgccaaggagagggcactgttgcctggggaactcggc
tgccggttcttgccaggtggcagtgggcagcagaaggtggatgtggcggtggtggctatg
cctgagttgcagccactgggtctggggatgagtctcaatggcctggaggagacagagaga
aggggagtcgggggaggtggtggtggaggggggaagggctccacgtggtccggagtgtgt
acagtgatcctggtagcctgcgtcctgctctttctcctgggaatcgtgctccacaacatg
tcctgtatctctaaacgctttactgtcatctcctgtggctga
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