Coregonus clupeaformis (lake whitefish): 121569841
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Entry
121569841 CDS
T08357
Symbol
dync2i1
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1 isoform X1
KO
K22869
WD repeat-containing protein 60
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121569841 (dync2i1)
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Dynein and associated proteins
121569841 (dync2i1)
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
121569841
NCBI-ProteinID:
XP_041737003
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All DBs
Position
7:58338803..58354660
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AA seq
1090 aa
AA seq
DB search
MPTDKKITKEDTWKSDDLRRHIRGGGHDEDSSRRRDDERRHRMGESVERRHRDPEREARR
EREKNRERDGTRERTKPRDIDKDRHQDRRKDGSRDRTGEKEARDKERSREQDRVKGTENV
KHRDGDRGSRDKIHDREEKENRDRERVKARERDTERERDELRKSDRDKEKEKDKERETGE
RDRERWSDRARKRNEERGEGGRDRDREHDREKRDRHKEREYLKESERYKDRSQEKQKDKE
RKERHPDREHSGQKEDREYREQHRKEKEERERRHKERAQHDTGESRRHDGESREVDRERV
HRERKGSDREREGKRDKHRERRHREEAGPERDPTERTSTKKSSSSDLRVHKEKTEPVKTK
EVVMRSESAWRSSQKQLSDTEEPVEIEEAPAENHGYDEAQDYEEDFEKMDYQEDFEDVDE
SEGEDEKQTHSHEEREEREEMSSQRREEIEAIQRAMDEENERVGSAQPRLSTEEDDRPKR
SRDSETLQSKGSQHGRFMDFVAAKHREVSKKVASKQKKRSTELLRLIDLDFSITFSLLDL
PPVNEYDMYIKNFGTTNTKQAYVQCNEDNTDRDIQTEDIEMSEKWTQHPAERNVGCGGPN
LSHDTSDESVTKLSIDSQRLATFLRSASQVVAVLLEEGRAEKQSLKKLRTQADTLSFSDG
CLQLNTKLPFLCGRQISLVKFSQVQRQTMLSVHSPSAKPSAVRLDSKSIICIWNIWEPSR
PQKILVYESEVHCCCFSPGKATLVFAGTSVGSVVLWDLREHASAHYTLRIGENDWTLRNP
TFSTDAVLVASGHMSSVSSVEAVPATVAEGLRPELPLLASDEESSGLSFQLASLDENGVL
NLWVVLELPKANDAGSHTDLGLRPGGKVKLLHSSTVLTTSERSSKRGAKKTTLLQTLLLK
FLPSDSNHFFIGTNMGLVNHGTSHGLKAPPKFYRPQVVGFRPVDVTSINFSPFGEPIFLV
GCGDGSVRLHTVLSEQPLMEWTSSTAGQPVVSVQWAKTRPTVFCVLDAASCLHIWDLLEK
DFEPVITEKIDADRVTAMAVFGDPAKQNTYSGISLATQSGKIEIQYFSKRFTVPESADLE
KLQIMMQEAF
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgataagaaaataacaaaggaagatacatggaaatcagatgaccttaggagg
cacataaggggtggaggacatgatgaagactctagcaggaggagagatgatgagagaaga
cacaggatgggggagtcagtagagcgacgccacagagacccagagagggaggccagaagg
gagagagagaagaacagagagcgagatggtacccgagagagaacaaaacccagagatata
gacaaggatagacatcaagacagaaggaaagacggctcgagagacaggacgggcgaaaag
gaggcgagagacaaagaaaggagcagagagcaagatagggttaaaggcacagagaatgtt
aagcacagggatggggacagaggcagtcgggacaaaatacatgatagagaagaaaaagaa
aacagggatagggagagggtaaaggccagagaaagggatacggagagggaaagagatgag
ctgaggaagagcgacagggataaggagaaggagaaggacaaggagagagaaacaggtgag
agggacagggagcgatggtctgacagagctagaaagagaaatgaggagaggggggaggga
gggagagacagggatagagagcatgatcgtgagaagagagatagacataaggagagggag
tatctgaaagagagtgaacgctacaaggacagatcgcaggagaagcagaaagacaaggaa
agaaaagaaagacacccggacagagagcattcaggacaaaaggaggacagagaatacagg
gagcaacatagaaaagaaaaggaggagagagaaaggagacacaaagagagagcacaacac
gatacaggtgaaagtcggagacatgacggtgaatccagagaagtggatcgtgagcgagtg
cacagggaacggaaggggtcggacagagagagggagggaaagagggataaacatcgagag
aggaggcacagagaagaagcaggtcctgagagggatcccacagaacggaccagcaccaag
aaatcatcatcctcagacctcagagttcacaaggaaaagacagagcctgttaaaactaag
gaagtagtgatgcgatctgagtcagcgtggaggtctagtcagaaacaattaagtgacaca
gaggagcccgtggaaatcgaggaggctccggctgagaaccatggctatgatgaagctcag
gactatgaagaagactttgagaaaatggattatcaggaggattttgaggatgtggatgag
agcgagggagaggatgaaaagcagacacacagccatgaagagagagaagagcgggaggaa
atgagttcacagaggagggaggagatcgaggccattcagagagccatggatgaggagaac
gagagagtgggctctgcccagcccaggctaagcacagaggaggacgacagacccaaaagg
tcaagagattctgaaacgcttcaaagtaaaggttcacagcacgggaggttcatggacttt
gttgctgcgaagcatcgtgaggtcagcaaaaaggttgccagcaaacagaagaaacgcagt
acagagctgcttcgcctgatcgacctggacttctccatcaccttctccctcctggatctg
ccccctgtcaatgaatatgacatgtacatcaaaaactttggaacaacaaacactaaacag
gcttatgtccagtgcaacgaggacaatactgatcgagacattcaaacagaggacatcgag
atgagcgagaagtggacacagcatcctgcggagaggaacgtaggctgtggaggtcccaac
ctttcccacgatacgtctgatgaatctgtgaccaaactgagcatcgattcacagcgccta
gcaacatttctgcgctcagcctcacaggtggttgcggtactgttggaagagggtagggct
gagaagcaatcactgaagaagctgaggactcaagcagacactctctctttcagcgacggg
tgtttacagctcaataccaagcttccatttctatgtggtcgtcagatcagcctggttaaa
ttctcccaggtgcagaggcagaccatgctgtccgtgcacagcccctcggccaagcccagc
gccgtgcgcctcgacagcaagtccatcatctgtatctggaacatctgggagccctcccgc
ccacagaagattcttgtctacgagtccgaggtgcactgctgctgtttcagccctgggaaa
gccacgctggtgtttgcgggcacgtccgtgggttctgtagtcttgtgggacctgagggag
cacgccagtgcccactacactttaaggataggggagaatgactggactctccgcaaccca
accttctccacagatgccgtgctggtagcgtcgggccacatgtcatcagtgagctctgtg
gaggccgtccctgccaccgtggctgagggcctgaggccagagcttccccttttggcttct
gatgaagagtcatcaggattgtcattccagttggcttctcttgatgaaaatggggttctg
aatctatgggtggtactggagctccctaaagccaacgatgccgggtcgcacacagacctc
gggctccggcctgggggcaaagtgaaactgctccacagttccacagtccttaccaccagc
gagaggtcttcaaaacgaggcgctaagaaaacaacactgttacagacgctgctgttaaaa
tttctgccctctgattccaaccattttttcattggcacaaatatgggtcttgtgaaccat
gggaccagtcacgggttaaaggctcctccaaagttctaccggcctcaggtggttggattc
agacctgttgatgtcacctccatcaacttttctcccttcggagaacccattttcctggtg
ggctgtggggatggcagtgtcagactacacacagtgctgagtgagcagcctctgatggag
tggaccagcagtacagcagggcagccggtggtgtcagtacagtgggccaagaccaggcca
acagtcttctgtgttctggatgctgcctcctgccttcacatatgggacctgctggagaaa
gactttgagcctgtaatcactgaaaagattgatgctgacagggtaacagccatggctgtt
tttggtgaccctgcaaagcagaacacatattcaggaatatcactagcaacgcagtcgggg
aagatagaaattcagtatttcagcaagagatttacagtgcctgaatctgctgacctggag
aaactacagatcatgatgcaagaggccttttga
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