Coregonus clupeaformis (lake whitefish): 121569901
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Entry
121569901 CDS
T08357
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121569901 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121569901 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121569901 (si:dkey-37o8.1)
03012 Translation factors [BR:
cclu03012
]
121569901 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
cclu04131
]
121569901 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121569901 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121569901 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121569901 (si:dkey-37o8.1)
Translation factors [BR:
cclu03012
]
Eukaryotic type
Elongation factors
121569901 (si:dkey-37o8.1)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121569901 (si:dkey-37o8.1)
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121569901 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
Motif
Other DBs
NCBI-GeneID:
121569901
NCBI-ProteinID:
XP_041737140
LinkDB
All DBs
Position
7:complement(16501842..16504552)
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AA seq
459 aa
AA seq
DB search
MVKERTHINVVIIGHVDSGKSTTTGHLVYKCGGVDPRTIEKFEKAAAQMGKSSFKYAWVL
DKLKAERERGITIDISLLKFNTHKYTITIIDAPGHRDFIKNMITGTSQADVALLVVSSAK
GEFEAGISRNGQTREHALLAYTLGVKQIIVAVNKMDVTEPPYSQKRFGEVVQSVSTFLKR
IGYDPTAVPFVPISGWTGENMLAPSQKMSWFKESKVKSGPGHVNGRTLLEVLDSIHPPVR
IANKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMILMFSPAKLTAEVKSIEMHHQGLQ
TAGPGHNVGFNIKNVSVKNLRRGDVAGNAQHDPPSDVNSFVAQLIILNHPGKIKTGYSPV
LDCHTTHVTCRFAELREKIDRRTGKKLEDFPQTLQSGDAATVKMSPNRPLCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVDKDHGSKKHAQRPSLKMN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagagaacccacataaacgtggttatcataggccatgttgacagcggaaaa
tcaaccaccactggtcacctggtctacaaatgcggtggtgtcgacccaagaacaatcgag
aagtttgagaaggctgcagcccagatgggcaagagctctttcaaatatgcctgggtgtta
gacaaactgaaagctgagagggagcgaggaattaccattgacatttcattgttgaaattc
aacacgcacaaatacactatcacaataattgatgctccaggccatcgtgacttcatcaag
aacatgatcacagggacatcacaggctgatgttgccctcctggtggtgtcttctgccaaa
ggggagtttgaggctggtatctccaggaatggccagaccagggagcatgccttgctcgcc
tacacgctcggtgtcaagcaaatcattgtcgccgtgaacaagatggacgtgactgagcca
ccatacagccagaagcgctttggtgaagtggtccaaagcgtgagcactttcctcaaaaga
atcggctacgatcccactgctgtgccatttgttcccatctctggctggaccggggagaac
atgcttgccccatctcagaaaatgtcctggttcaaagaatcgaaagtcaagagcgggcca
ggccatgtaaacgggagaactctacttgaagtcctggactccatccatccaccagtgcgc
attgccaacaagcctctgaggctgcccctgcaggatgtatacaagatcggaggagtgggc
acggttccagtggggaagatcgagacagggattctgaagcccggcatgatcctgatgttc
tcccccgccaagctgactgcggaggtaaagtccattgagatgcaccaccagggtctgcag
acggccgggcctggccacaacgtgggctttaacatcaagaacgtgtctgtaaagaacctt
cgccgtggagatgtggctggcaatgcccagcatgaccctccctctgatgtcaacagcttt
gtggcacagctcataatcctgaaccatcctggcaaaatcaagactggctactctcccgtg
cttgactgccacaccacccatgtgacctgccgctttgcagagctgcgggagaagattgac
cgtcgcacagggaagaagctggaggattttccccagaccctgcagtctggtgacgctgcc
actgtcaagatgagccccaacagaccactctgtgtggagagcttcttcacctaccctcct
ttaggtcggtttgcagcgagggacttgaaacagactgttgctgtgggagtcattaagtcg
gtggataaggaccatggatcaaagaagcatgcacaaaggccaagtctcaaaatgaattaa
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