KEGG   Coregonus clupeaformis (lake whitefish): 121569901
Entry
121569901         CDS       T08357                                 
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121569901 (si:dkey-37o8.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121569901 (si:dkey-37o8.1)
   03016 Transfer RNA biogenesis [BR:cclu03016]
    121569901 (si:dkey-37o8.1)
   03012 Translation factors [BR:cclu03012]
    121569901 (si:dkey-37o8.1)
   04131 Membrane trafficking [BR:cclu04131]
    121569901 (si:dkey-37o8.1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121569901 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     121569901 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:cclu03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    121569901 (si:dkey-37o8.1)
Translation factors [BR:cclu03012]
 Eukaryotic type
  Elongation factors
   121569901 (si:dkey-37o8.1)
Membrane trafficking [BR:cclu04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    121569901 (si:dkey-37o8.1)
Exosome [BR:cclu04147]
 Exosomal proteins
  Proteins found in most exosomes
   121569901 (si:dkey-37o8.1)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Ras
Other DBs
NCBI-GeneID: 121569901
NCBI-ProteinID: XP_041737140
LinkDB
Position
7:complement(16501842..16504552)
AA seq 459 aa
MVKERTHINVVIIGHVDSGKSTTTGHLVYKCGGVDPRTIEKFEKAAAQMGKSSFKYAWVL
DKLKAERERGITIDISLLKFNTHKYTITIIDAPGHRDFIKNMITGTSQADVALLVVSSAK
GEFEAGISRNGQTREHALLAYTLGVKQIIVAVNKMDVTEPPYSQKRFGEVVQSVSTFLKR
IGYDPTAVPFVPISGWTGENMLAPSQKMSWFKESKVKSGPGHVNGRTLLEVLDSIHPPVR
IANKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMILMFSPAKLTAEVKSIEMHHQGLQ
TAGPGHNVGFNIKNVSVKNLRRGDVAGNAQHDPPSDVNSFVAQLIILNHPGKIKTGYSPV
LDCHTTHVTCRFAELREKIDRRTGKKLEDFPQTLQSGDAATVKMSPNRPLCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVDKDHGSKKHAQRPSLKMN
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggtgaaggagagaacccacataaacgtggttatcataggccatgttgacagcggaaaa
tcaaccaccactggtcacctggtctacaaatgcggtggtgtcgacccaagaacaatcgag
aagtttgagaaggctgcagcccagatgggcaagagctctttcaaatatgcctgggtgtta
gacaaactgaaagctgagagggagcgaggaattaccattgacatttcattgttgaaattc
aacacgcacaaatacactatcacaataattgatgctccaggccatcgtgacttcatcaag
aacatgatcacagggacatcacaggctgatgttgccctcctggtggtgtcttctgccaaa
ggggagtttgaggctggtatctccaggaatggccagaccagggagcatgccttgctcgcc
tacacgctcggtgtcaagcaaatcattgtcgccgtgaacaagatggacgtgactgagcca
ccatacagccagaagcgctttggtgaagtggtccaaagcgtgagcactttcctcaaaaga
atcggctacgatcccactgctgtgccatttgttcccatctctggctggaccggggagaac
atgcttgccccatctcagaaaatgtcctggttcaaagaatcgaaagtcaagagcgggcca
ggccatgtaaacgggagaactctacttgaagtcctggactccatccatccaccagtgcgc
attgccaacaagcctctgaggctgcccctgcaggatgtatacaagatcggaggagtgggc
acggttccagtggggaagatcgagacagggattctgaagcccggcatgatcctgatgttc
tcccccgccaagctgactgcggaggtaaagtccattgagatgcaccaccagggtctgcag
acggccgggcctggccacaacgtgggctttaacatcaagaacgtgtctgtaaagaacctt
cgccgtggagatgtggctggcaatgcccagcatgaccctccctctgatgtcaacagcttt
gtggcacagctcataatcctgaaccatcctggcaaaatcaagactggctactctcccgtg
cttgactgccacaccacccatgtgacctgccgctttgcagagctgcgggagaagattgac
cgtcgcacagggaagaagctggaggattttccccagaccctgcagtctggtgacgctgcc
actgtcaagatgagccccaacagaccactctgtgtggagagcttcttcacctaccctcct
ttaggtcggtttgcagcgagggacttgaaacagactgttgctgtgggagtcattaagtcg
gtggataaggaccatggatcaaagaagcatgcacaaaggccaagtctcaaaatgaattaa

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