Coregonus clupeaformis (lake whitefish): 121569904
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Entry
121569904 CDS
T08357
Symbol
asap1b
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121569904 (asap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121569904 (asap1b)
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121569904 (asap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
PH
BAR
SH3_9
SH3_1
Ank_4
SH3_2
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
121569904
NCBI-ProteinID:
XP_041737148
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Position
7:16412725..16498970
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AA seq
1199 aa
AA seq
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MTIQNEPDMMRPASILFCINQVYIHSVQIPNLMCIDFGDSQVMRSSSSRLSNFSSKDSLW
NPSRMPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVNILEEALDQDRTALQKVKK
SVKAIYSSGQDHVQNEENYAQALDKFGSNFISRENPDLGTAFVKFSTLTKELSTLLKNLL
QSLSHNVIFTLDSLLKGDLKGVKGDIKKPFDKAWKDYEAKFTKIEKEKREHAKQHGMIRT
EITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLIKYYHAQCNFFQDGLK
TADKLKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKESRRDSQSKQGGYS
MHQLQGNKEFGCEKKGYLMKKSDGLRKVWQRRKCSVKGGMLTISHATSNRQPVKLNLLTC
QVKPCAEDRKCFDLISHNRTYHFQAEDEQEFVIWISVLSNSKEEALNMAFRGEEDGVGGE
DGLEDLTKAIIEEVLRMPGNEVCCDCGAADPKWLSTNLGILTCIECSGIHREMGVHISRI
QSMELDKLGTSELLLAKNVGNSSFNEIMEGNLPCPSPKPTPSSDMTVRKEFINAKYVDHK
FARKTCTSSAAKTIELCEAVKSRDLLSLIQVYAEGVELMEPLPEGGQEAGETALHYSVRT
ADQTSLHLVDFLVQNSGNLDKQTEWGNTALHYCCMYEKHQCLKLLLRGKPATDITNQNGE
TALDIARRMKNSQCEEALVQAAAGKYYPHVHVEYEWSLRLDELDESDDDLDDKPSPIKKD
RSPRPQSFCHSSSLSPHDKLSLPGFISHRDKQQRMSYSAFTNQMYSASTDLTSSSPVADA
PPLPPRNQGKAPHLAFLGSHSHYATLAGTRPYITPPSTLIPGGSSTLSKKRPPPPPPGHK
RTLSDPPSPLSHSRGGIYVGSDSTPPPANKMSPLSNKFEGIPQQQSTTSSNTKSTLGPRV
LPKLPQKVALRKIDTIHPSMDKPGLPPEVLQKSPPGPECLTKAILPDKPQLGDLPPKPQP
SELPPKPGELPPKPQLSDLPPKPQLGDLPPKPLLKDLPPKPQLSQDGHPKPGAADLLSTR
PPPGEPAPKPQPPESPAANQQAETESPSPQGSEDTNGSPACAPDTPVPLPRKNTGKTKSR
RVKTIYDCQADNDDELTFVEGEVIIVTGEEDGEWWIGHIEGHLERKGVFPMSFVHILSD
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgactattcaaaatgaacctgatatgatgcgcccagcaagtattctcttctgcatcaat
caagtgtacattcactctgttcagattccaaatttgatgtgcatcgatttcggtgacagt
caagtcatgagatcctcctcttcccgtctgtcaaatttctcctctaaagattctttatgg
aatccgagtcggatgcctgatcaaatatcggtgtccgagtttctctcggagacaacagag
gactacaattctcctaccacatccagcttcacgacccgtctgcagagctgtaggaacaca
gtcaacattctggaagaggctttggatcaggacaggactgcgctgcagaaggtgaagaaa
tcggtcaaggcgatctacagctcaggccaagaccatgtccagaatgaggagaactatgcc
caggctctggataagtttggcagcaacttcatcagccgagaaaaccctgacctgggaaca
gctttcgtcaagttctccaccctgaccaaggagctgtcgaccctgctcaagaacctgctc
cagagcctgagccataatgtgatcttcaccctggactcgctgctgaagggggacctgaaa
ggcgtgaaaggggatataaagaagccctttgacaaagcctggaaggattatgaagctaag
tttacaaagatcgagaaggagaagagggaacatgccaagcagcacgggatgattcgtacg
gagataacaggcgctgagattgctgaggagatggagaaggaacgccgtctcttccaactc
cagatgtgtgagtacctgatcaaagtcaacgagatcaagaccaagaagggagtggacctt
ctccagaacctcatcaagtattaccacgcacaatgcaacttcttccaagatggcttgaag
acggcggataaactgaagcagtacattgagaagctggctgctgacctctacaatataaag
cagacccaggatgaggagaaaaaacagctgactgctcttagagacctgatcaagtcctcc
cttcagctggaccagaaggagtctagaagagactcccagagtaagcaggggggttacagt
atgcaccagttgcagggcaacaaagagtttggctgtgagaagaaaggctacctgatgaag
aagagtgatgggctgaggaaggtgtggcagaggaggaagtgttcagtgaagggtggcatg
ctcactatctctcatgctacgtccaacaggcagcctgtgaaacttaacctgctcacctgc
caagtcaagccctgcgctgaggacaggaagtgcttcgacctcatttcccataaccggaca
tatcacttccaggctgaggatgaacaggagtttgtcatctggatctctgtgctatccaac
agtaaggaggaagctctgaacatggccttccgcggagaagaggacggagtaggaggagag
gatggcctggaggacctgaccaaagccatcatagaggaggtgctgcgcatgcctggcaat
gaagtctgctgtgactgtggcgctgcagatccaaaatggctgtccactaacctgggcatc
ctgacctgcatcgagtgctctggcatccaccgggagatgggagttcacatctcacgcatc
caatccatggagctagataagctaggcacctctgaactcttgctggctaagaacgtaggg
aacagtagtttcaatgaaataatggaggggaaccttccttgtccctcaccgaaacccact
ccttcaagtgacatgacagtgaggaaggagttcatcaatgctaagtatgtggaccacaag
tttgcacggaagacctgtacctcctcggcagctaagaccattgagctgtgtgaggcggtc
aagtccagggacctgctgtctctcatccaggtgtatgctgagggggtggagctaatggag
ccactgcccgagggtggacaagaggccggagagactgcgctccactactctgtgcgcacc
gccgaccagacctcactgcacctggtggacttccttgtacaaaacagtgggaacctggat
aagcagaccgagtggggaaacactgccctgcactactgctgcatgtacgagaaacaccaa
tgcctcaaactactgctgaggggcaaaccagccactgacatcaccaatcagaatggtgag
acggcgctggatattgccaggcgtatgaagaacagtcagtgtgaggaggcactggtgcag
gctgcagcggggaagtattaccctcatgtccacgtggagtatgagtggagcttgaggctg
gacgagctggacgagagcgatgatgatctcgatgacaagcctagtcccataaagaaggac
cgttccccgcgcccccagagtttctgccactcgtccagcctgtctccccatgacaagctg
tctctgccgggcttcatcagccaccgggacaaacagcagcgcatgtcttacagcgccttc
accaaccagatgtactccgcctccaccgacctcacttcctcttcccccgtggccgatgcc
ccccctctgccccccaggaaccagggcaaagcgccgcacttggcattcctcggctctcac
tcgcactacgccactctggccggcactcgaccatacatcactcctccctccaccctcatc
cccggaggcagctccaccctgtccaagaagaggcctccgccccctccccccgggcacaaa
cgcaccctgtctgacccgcccagcccgctttcccacagtagagggggcatttacgtggga
agtgactccacccctccacctgctaacaagatgtcaccgttatccaacaagtttgagggc
attccacagcagcaaagcactacttctagcaacacaaagtctacacttggtccaagggtt
ctacccaaactacctcagaaagtggcactgcgtaagatcgacaccatacacccgtctatg
gacaaacccggtctgcctccggaggtgctccagaaatcccctccaggacctgaatgccta
acaaaagccatcctacccgacaagccccaactaggggaccttccccccaaaccccagccc
tctgagctgccccctaaacctggagaactgccacccaagccccagctctccgacctcccc
cccaaaccgcagctaggggacctacctcccaaacccctgctcaaagacctaccccccaaa
cctcagctctcccaagacggccatccgaaaccgggggcagcagatctgctcagtacgaga
ccaccccctggagagcctgcgccgaagccccagcccccggagtcaccggcggccaatcag
caggcagagactgagagcccatccccccagggtagcgaggacaccaatgggagcccggcc
tgtgctccagacacaccagtgcccttgcccaggaagaacacggggaagaccaaatctcgg
cgggtgaagaccatctatgactgccaagccgacaatgatgacgagctgacgtttgtggag
ggagaggtgatcatagtgacgggagaggaggacggggagtggtggatcggccacattgaa
gggcacctggagaggaaaggagtgttcccaatgtcctttgtccacatcctgagtgactga
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integrated database retrieval system
