Coregonus clupeaformis (lake whitefish): 121569906
Help
Entry
121569906 CDS
T08357
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121569906
04121 Ubiquitin system [BR:
cclu04121
]
121569906
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121569906
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
121569906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
121569906
NCBI-ProteinID:
XP_041737154
LinkDB
All DBs
Position
7
Genome browser
AA seq
1126 aa
AA seq
DB search
MAEGSVTDSLDLNPDGTSSRQKRNQQQSRRGWNRENHNRNWSGSNNYGPAPQQQQGHFHH
GVKQSHVHDNLTLPVNFHPPPYHQEDVPRGRRRGGGNGGGGGGGRGSMGQPPRWNRPGVD
TGTGPPALPGGHHGLLGGGGGNRPGTPPIDGPSWRRRDPGGLGEEVGPAHEDHQDTSPEK
PRWFSQEPRREERGERSAKGPPHSLEKHENQENHSTGGGGWEPAEPREETRPSEMGARNR
KGGRAEERNRHVDAQKKFPEPKRRQGPIKVYPQERKDPERGARETPSGHRDKPGSSTEEE
PSWRGQGRGQGRRTPLQDRGQRRTPNSDHRPGQKRWDNVPIKSKETQTGCLIEQLSEEKY
ECMVCCEVIRVMAPVWSCHSCFHVFHLNCIKKWARSPASQADETNDGWRCPACQNVVFQP
PNIYKCFCGKVTNPEFQRSEIPHSCGDMCGKKRSGADCKHPCNILCHPGPCPQCPASVTK
ACICGRTSQPMRCGQATAIHCDKQCEAILNCSEHTCIQVCHSGLCQPCPLQVKQVCYCGV
VSREVLCGTDKDNFDGSGHFSCQKACGKMLDCEAHQCQQVCHPGPCLPCPRSPRLVRSCP
CGQTALAKLLELGYPERRSCSDPIPSCGKTCSKPLPCGSNETIHICEKLCHEGSCGPCSL
TSTIKCKCGSKTKDVPCAAIQNEDELIFTCEKRCLKKRSCGRHKCGELCCVGAEHKCSLI
CGYKLNCGLHRCQELCHRGNCQPCWQTSFDELACHCGMSILFPPIACGTKPPECKNLCTR
RHECDHPVFHNCHSEEKCPPCTYLTQKWCMGKHEQRSNIPCHLQDISCGLTCNRVLLCDL
HRCRRICHRAECLAEGVCSQPCLLPRPDCGHPCNAPCHKGSSCPRSTCTAKVALQCDCGR
RKETVVCTEAASAHQRYAAIAMASKLSDMQLGDSVDIGLITKKEMKQTKLECDEGCAALE
RNRRLAEALQIDPSVNPFNMRSSSSTYSDSLRVDARKDFKFVSEVEEEIKNLVELTSKGK
QSKRSHCFPPMNREHRKLVHELAEAYNVESVSYDSEPKRNIVITAIRGKSACPNSTLTSL
IERDTGVPRAPLPIAHIKHSSKADSVSSWSKSVKEEPVIDYFDVQD
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcagtcacagactctctggatttgaatccagatgggacttcatcacga
cagaaacgtaaccagcagcaatccaggaggggttggaacagagagaaccacaaccgtaac
tggagtggttctaataattacggcccagcaccacagcagcagcaaggccattttcaccat
ggggtcaaacaatctcatgtccatgacaatttaactctccctgtaaatttccatcctcct
ccctaccaccaagaggatgtaccaaggggtcgaagaagaggagggggtaacggaggtggt
gggggagggggccgaggctcaatgggccagcctccaaggtggaataggcctggggttgac
actggaactggcccccctgccttacccgggggccaccatggactgcttggtggtggtgga
ggcaacaggcctggaacaccccccatagacgggcctagctggcgtcgacgagaccctggc
ggcctgggtgaagaggtagggcctgcccacgaagaccaccaggacacctcccctgaaaag
cccagatggttcagccaggagccgcggagagaagagagaggggaaaggagcgctaaagga
cctcctcactctctggaaaagcacgagaaccaggaaaaccattctacaggaggaggaggc
tgggaacctgctgagcccagagaagaaacacgaccatcagaaatgggggccagaaaccgg
aaaggcgggagagccgaggaaaggaaccgccacgtcgacgctcaaaagaaattccccgag
cccaagcgacgccaggggcctatcaaagtatatccccaggagaggaaggaccctgagagg
ggagccagagagaccccctctggccatcgtgacaaaccgggctccagcactgaagaagag
cccagctggaggggtcaggggagaggccaggggagacgcacccccctgcaggacagaggc
cagaggagaacacctaactcagaccacaggcctggacagaagaggtgggacaacgtgccc
atcaagagcaaggagactcagacaggttgcctgatcgagcagctgtctgaggagaagtat
gagtgcatggtgtgctgtgaggtgatcagagtcatggctccagtctggagctgccacagc
tgcttccatgtcttccatctcaactgcatcaagaagtgggcccgctccccagcctcacag
gcagatgaaacaaatgacgggtggaggtgtccggcctgtcagaatgttgtcttccaaccc
ccaaacatctacaagtgcttctgtggcaaagtgaccaaccctgagttccagcgtagtgag
atcccacacagctgtggagacatgtgtgggaagaagaggagcggagcggactgcaagcac
ccctgtaacatcttgtgtcaccccggaccttgtccccagtgtcctgcctctgtcaccaaa
gcctgcatctgcggaagaaccagtcagccaatgcggtgtggccaggccactgccatccac
tgtgacaagcagtgtgaagccatcctcaactgttcggaacacacctgtatccaggtgtgc
cacagcggactgtgccagccttgcccgctacaggtcaagcaggtgtgctactgcggtgtt
gtctctcgggaggtactctgtgggacggataaagacaactttgacggctcaggacacttc
tcctgtcagaaagcatgtggcaagatgttggactgtgaggcccaccagtgccagcaggtg
tgccaccctgggccgtgcctgccgtgcccgcgctcccccaggctggtgaggagctgcccc
tgtgggcagacggccctggccaagctcctggagctgggctaccccgaacgccgcagctgc
tccgaccccatcccctcctgtggcaagacctgcagcaagcctctgccctgcggctccaat
gagaccatccatatctgtgagaagctgtgccatgagggcagctgtggtccctgctcgctc
acctccaccatcaaatgcaaatgcggctctaagaccaaggatgttccctgtgcagctatc
cagaatgaagatgaactgatttttacctgtgagaagcgctgcctcaaaaaacgctcctgt
ggccgacacaaatgtggcgagctgtgctgtgtgggcgcggaacacaagtgctctctgatc
tgtggctacaagctcaactgtggcctccaccgctgccaagagctctgtcaccgtgggaac
tgccaaccctgctggcaaaccagttttgatgagctggcctgccactgtgggatgagtatc
ctgttcccacccatcgcctgtggcaccaagcccccagagtgtaagaacctgtgtaccagg
agacacgagtgtgaccacccagtgttccacaactgccacagtgaagagaagtgcccaccc
tgtacctacctcactcagaagtggtgcatgggaaagcatgagcaaaggagcaacatcccg
tgccaccttcaggacatctcctgtggcctgacctgcaacagggtgctgctgtgtgacctc
caccgctgccgccgcatctgccaccgggcagagtgtctggccgagggcgtctgcagccag
ccctgcctgctgccccggcccgactgtggccacccctgcaacgccccttgccacaagggc
agcagctgcccgcggagcacctgcactgccaaggtggccctacagtgtgactgcggtcgg
agaaaggaaacggtagtgtgcacggaggcagccagcgcccatcagaggtatgcagccatt
gccatggccagtaagctgtctgacatgcagctgggtgactctgtagacatcggtctcatc
actaagaaggagatgaaacagaccaagttggagtgtgacgagggttgtgctgcactggaa
aggaacaggcgattggctgaggccttgcagattgacccgtcagtgaaccccttcaacatg
cgctcttcctcctcaacatacagtgacagcctcagagttgatgccagaaaagattttaag
tttgtcagcgaggtagaagaggagatcaagaatctggttgagctcaccagcaagggtaaa
cagtccaaaaggagccactgcttcccccccatgaacagggagcacaggaagctggtccac
gagctggcggaggcctacaacgtggagagtgtgagctacgacagcgagcccaaacgcaac
atagtcatcaccgccatcagggggaagtctgcctgtcctaactcaaccctgacctccctg
atagagagagacactggcgtcccgagggctcctctacccattgcccatatcaaacatagc
agcaaggctgacagtgtgagcagctggtccaagtcagtcaaagaagaaccggtgatcgac
tacttcgatgtccaggattaa
DBGET
integrated database retrieval system
