Coregonus clupeaformis (lake whitefish): 121569908
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Entry
121569908 CDS
T08357
Name
(RefSeq) chondroitin sulfate glucuronyltransferase isoform X1
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu01100
Metabolic pathways
Module
cclu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121569908
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121569908
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
121569908
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121569908
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
121569908
NCBI-ProteinID:
XP_041737166
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Position
7:16329978..16337260
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AA seq
841 aa
AA seq
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MVSYLANVASHHLKKRHDVFLCITLTVNVIDLRQPTDKTSIIATESTKIERRTKEGGPTP
LADTDAWMLDVVLSGPALPLILGLSLGCSLSLLMVSWTQGDTEDSCRGELGNGGLFMGSN
RGDPPGDHKGGPGNEDFQPRIIPYHKDPNKPHKKVLREGPSEHRSPLIRTRYIHTELGIR
ERLLVGVLTSRATLNTLAVAVNRTVAHHFHRTFFFTGLRSPKVPHGMAVVAHGDDRPVWL
MYETVRHLHQHYGLDYDWFFLTQDDTYMQAERLAELVGHLSAGQDLYMGRAEEFIGGEER
ARYCHGGYGYLLSRSLLARLQPHLDTCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQEMT
YRYFELGKNADPEREDRAQFKNAFTVHPVSEPSLMYRLHKRFSQIELDWTYLQIQQLQVQ
INNLSELTPEGKVGATWPIGVNPPFRPKTRFEVINWEYFTEEHIYSCPDSSPKCELRGAD
RADVSAVLETAVERLNELYQPQLRFRKRHLLNGYRRFDPTRGMEYVLDLALEAFTQKGHS
QVIAKRVSLLRPLSTIEIIPMPYVTEATRVQVILPVTAREQDYVSNFLDMYVMNTLDTHD
NVLLTFLFVYDPFDAQRISQADVFAGIKAMIGEVEKRYSDVKIPWISVKTEVPSQVKLMD
IISKKHPVDTLFFLASVWTEVNADFLNRCRMNAISNWQVFFPVHFQEFSPAIVYRDQQPS
AASSFTAEALRDGRFDRHVFEEACFYNADYMAARTKMAADILDNDELLESMDVYEIFVRY
SGLHVFRAVEPALVQKYVRRACNPRFSEDIYHRCVLSNLEGLASRSHLAMALFEQEQANS
T
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggtaagctacctggctaatgtagctagccatcatttgaagaaaagacatgatgtgttt
ctgtgcataactctgacagtgaatgtgattgatctccgacaacctacagacaaaacatcg
ataattgcgactgaatcaactaaaattgagaggagaacgaaggagggaggaccaacaccg
ttagctgataccgatgcttggatgttggatgttgttttgtcagggcctgctcttcccctt
atcctggggctctctttaggatgcagcctgagcctgctgatggtctcctggacccaggga
gacacagaggactcgtgtcgaggtgaactgggcaatgggggtctcttcatgggcagcaat
aggggagacccaccaggggaccataaaggtggtcctgggaatgaggacttccagccacgc
atcataccataccacaaggaccccaacaaaccacacaagaaggtcctcagggaaggtccc
tctgaacaccgctctcctctgatcaggacgcgctacatccacactgagctgggcatccga
gagcgcctcctggtgggtgtgctgacctcgcgggccaccctcaacacgctggcagtggcg
gtgaaccgcaccgtggcccaccacttccaccgcaccttcttcttcacgggcctgcgcagc
cccaaggtcccccacggcatggcggtggtggcccacggcgacgaccggcctgtgtggctg
atgtacgagacggtgcgccacttgcaccagcactacggcttggactacgactggttcttc
ctgacccaggacgacacctacatgcaggccgagaggctagccgagttggtgggccacctc
agcgctggtcaggacctctacatgggccgggccgaggagttcatcggtggggaggagagg
gccaggtactgccacgggggttatggttacctgctctcccggagcctgctggcccgcctg
cagccccacctggacacctgccgcaatgacatcctcagcgtcaggcctgacgagtggctg
ggccgctgcatcatcgactacctgggtctcagctgtgtggaggtgcaccaggagatgacg
tatcgctactttgagctggggaagaatgcagacccagagcgagaggacagagcccagttt
aagaatgccttcacggttcaccccgtgtcagaacccagcctcatgtaccgcctgcacaaa
cgctttagccagatcgaactggactggacctacctacagatacagcagctgcaggtccag
atcaacaacctgagtgagctgaccccagaggggaaggtgggggccacctggcccatcggc
gtcaacccccccttcaggcccaaaacacgattcgaggtcatcaactgggagtacttcacc
gaggagcacatttactcgtgcccagacagctcccccaagtgtgagctgcgtggcgccgac
cgggctgacgtgagcgccgtgctggagacggctgtggagcgcctcaacgagctctaccag
ccccagctgcgcttcaggaaacggcatctgctcaatggctaccggcgcttcgaccccacg
cgaggcatggagtacgtgctggacctggccctggaggctttcacccagaagggtcacagc
caggtcatcgccaagcgggtcagcctgctccgccctctcagcaccatcgagatcatcccc
atgccctacgtgacggaagccacccgggtgcaggtcatcctgccagtcacggcccgcgag
caggactatgtgagcaacttcctggacatgtacgtgatgaacactctggacacgcatgac
aacgtcctgctcaccttcctgttcgtctacgaccccttcgacgcccagcggatcagtcag
gctgacgtgttcgccggcatcaaggccatgattggcgaggtggagaagcgttatagcgac
gtgaagatcccctggatcagcgtgaagactgaggtgccgtcacaggtcaagctgatggac
atcatctccaagaagcacccggtggatacgctcttcttcctggcctcggtgtggaccgag
gtcaacgccgacttcctcaaccgctgccgcatgaatgccatcagcaactggcaggtgttc
ttccccgtccacttccaggaattcagcccggcaattgtgtaccgcgaccagcagccctca
gctgcctcctccttcactgccgaggcgctgcgcgatggacgcttcgaccgccacgtcttc
gaggaggcctgcttctacaacgccgactacatggctgcgcgcaccaagatggccgccgac
atcctggacaacgatgagctgctggagagcatggacgtgtacgagatctttgtgcgctac
tcgggcttgcacgtgttccgggcggtggagccggcgctggtgcagaagtatgtgcggcgg
gcgtgcaacccgcgcttcagcgaggacatctaccaccgctgtgtgctcagtaacctggag
ggcttggcctcgcgatcccacctggccatggccctgtttgagcaggagcaggccaacagc
acctag
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