Coregonus clupeaformis (lake whitefish): 121569910
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Entry
121569910 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family F member 2
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121569910
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121569910
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_28
AAA_15
MMR_HSR1
AAA_22
AAA_16
NACHT
AAA_14
VapE-like_dom
AAA_33
AAA_23
RNA_helicase
Dynamin_N
MukB
Hac8_like_N
Motif
Other DBs
NCBI-GeneID:
121569910
NCBI-ProteinID:
XP_041737173
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Position
7:complement(16319731..16329305)
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AA seq
612 aa
AA seq
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MPSDLAKKKAAKKKEAAKARQARTKKTDEFNGENDQPESQENGADINGVASLTKELDEFE
LKKLDARAVTGVLASHPNSTDVHIASLSLTFHGQELLTDTSLELNSGRRYGLLGLNGTGK
SMLLSAIGHREIPIPEHIDIYHLTREMAPSDKTALQCVMEVDEERIQLEKEAERLAAEDS
ECEKLMELYERLEELDADKAEVRASRILHGLGFSAAMQQKKLKDFSGGWRMRVALARALF
IKPFMLLLDEPTNHLDLDACVWLEEELASFKRILVLISHSQDFLNGVCTNIIHLHQKKLK
YYTGNYDQYVKTREELEENQMKRFNWEQDQISHMKNYIARFGHGSAKLARQAQSKEKTLQ
KMVASGLTERVLDDKTLSFYFPSCGKIPPPVIMVQNVSFKYSDNQPHIYKNLEFGIDLDT
RVALVGPNGAGKSTLLKLLMGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMM
KCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPT
NHLDIETIDALADAINDYEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKEH
LKSKIDKQAHDI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcagatcttgcaaagaagaaggcagcgaagaagaaggaagctgcgaaggcccgc
caggcgcgtaccaagaaaacggatgagtttaatggggagaacgaccagccagagagccag
gagaatggagcagacatcaatggggtggctagcctgaccaaggagctggatgagtttgag
ctgaagaagctggatgcacgggcggtgacgggggtgctggcgtcccaccccaacagcacc
gacgtgcacattgccagcctgtcgctcaccttccacggtcaggagctgctgaccgacacc
agcctagagctcaactcgggacggcgctacggcctcctcggcctcaacggcacaggaaag
tccatgttgttatcagccatcggccaccgcgagatccccatccccgagcacatagacatc
taccacctgaccagggagatggcccctagtgacaagacggccctgcagtgtgtgatggag
gtggacgaggagaggatccagctggagaaggaggcagagcggctggcagccgaggactct
gagtgtgagaagctgatggagctgtacgagcgcctggaagagctggatgcagacaaggcg
gaggtgcgggcctccaggatcctccacggcctaggcttcagcgccgccatgcagcagaag
aagctcaaggacttcagcggaggctggaggatgcgtgtggctctggctagagctctgttc
atcaagcccttcatgttgctgctggacgagcccaccaatcaccttgacctggatgcctgt
gtatggctggaggaggagctcgcatcgttcaagcgaatccttgtgctcatctctcactct
caagacttcctgaacggagtttgcaccaacatcatccacctgcaccagaagaagctcaag
tactacacgggtaactatgaccagtacgtgaagaccagggaggagctagaagagaaccag
atgaaacgcttcaactgggagcaggaccagatctcacacatgaagaattacattgccagg
tttggtcatggctcggccaagctggcacgacaggcccagagcaaagagaagacgctgcag
aagatggtggcctcagggctgactgaacgtgtgttggatgacaagacactgtcattttat
tttccttcctgtggaaagatcccccctcctgttatcatggttcagaatgttagcttcaaa
tacagtgacaaccagccacacatatacaagaacctggagtttggcattgacctggacacg
cgagtggctctggtggggcccaatggagcagggaagtctacactcctcaaactccttatg
ggagagctcctccccactgacggcatgatcaggaaacattctcacgtgaagattggccga
tatcaccagcatctgacagagcagctggagctggacctgtctcctctggagtacatgatg
aagtgctacccagagatcaaggagaaggaggagatgaggaagatcatcggccgctacggc
ctcacaggaaaacaacaggtgagtccgatcaggaacctgtcggacggccagaagtgtcgg
gtgtgtttcgcctggctggcctggcagaacccccacatgctcttcctggatgaacccacc
aatcacctggacatcgagaccatcgacgccctggctgacgccatcaacgactacgagggc
ggcatgatgctggtcagccacgacttcagactcatccagcaggtggctcaggagatctgg
gtgtgtgagaagcaaaccatcacaaaatggaacagagacatcctggcatacaaggaacac
ttgaaatcgaagattgacaagcaagcgcatgacatctag
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