KEGG   Coregonus clupeaformis (lake whitefish): 121569913
Entry
121569913         CDS       T08357                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121569913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121569913
Spliceosome [BR:cclu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121569913
 Complex B
    121569913
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 121569913
NCBI-ProteinID: XP_041737178
LinkDB
Position
7:complement(15808022..15822958)
AA seq 564 aa
MAVTEIAGGTALMMENGQGTGGKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYEIPEAAQLALEQMNSVMLGGRNIKVGRPGNIGQ
AQPIIDQLAEEARAYNRIFVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGRHKSFG
FIEYDKPQSSLDAVSSMNLFDLGGQYLRVGKAVTPPMPMLTPTQPGGLPPAAAVAAAAAT
AKITAQASMIPFQRDLLAFQEAVTGASILGAMAGANQMGQMGQMGQMGQMGQMGQMGIPQ
AVMAAQAPGMITGVYRDMCVTPVRPNLPVLPQVGLVNPVLASPPVITNPAQLNPSLQELQ
KKKQEEKEMLQDGTGQEMLSDQEHMSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDI
DDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMVSEMNKAIQALNDR
WFGGRKVIAEVYDQERFNSSDLSA
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcggtgacggagattgcgggagggacagctctgatgatggagaatggacagggcaca
ggtgggaagcttggccttccgcctctcaccccagagcagcaggaggctctacaaagggca
aagaagtatgccatggagcagagcattaagagtgtcttggtgaagcagaccattgcccat
cagcaacagcagctcacgaacttgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcggctcagcggcagcgtgctctagccatcatgtgccgg
gtgtatgtgggctccatatactatgagcttggggaggacaccatcagacaggcctttgcc
ccttttggccccatcaagagcattgacatgtcatgggactccgttacaatgaagcacaag
ggctttgcctttgtggagtatgagatcccggaggcggcacagctggctttggagcagatg
aactcagtcatgcttgggggcaggaacatcaaggtggggcggccaggtaacattggtcag
gcgcaacccatcatcgaccagctggcagaggaggcgcgcgcctacaaccggatcttcgtg
gcctccgtccaccctgacctctcagacgaggacatcaagagcgtctttgaggccttcggg
aggatcaagtcctgcacgttagccagggaccccaccacgggaagacacaagagctttggc
ttcatcgagtatgacaagccccagtcgtccctggacgcagtgtcctccatgaacctgttt
gacctggggggccagtatttgcgggtgggcaaggccgtcaccccgcccatgcccatgctg
actcccacccagcctggtggcctgccgcccgctgcagccgtggctgctgcagcagccacc
gctaagataacggcccaggcaagtatgattcccttccaaagggatctattggccttccag
gaggctgtgaccggggcgtccatcttgggggcgatggccggggcgaaccagatgggccaa
atgggtcagatgggccaaatgggtcagatgggccaaatgggtcagatgggcatccctcag
gcagtcatggctgcccaggcccccggaatgatcacaggtgtgtatcgagacatgtgtgtg
acaccagtgcgtcctaacctgccagtgctgccccaggtgggcctggtcaaccctgtgctg
gcctcaccgcccgtgatcaccaacccagcccaactcaacccctctctacaagagcttcag
aagaagaagcaggaggagaaggagatgctgcaggatgggacaggccaggagatgttgagc
gaccaagaacacatgagcatttcaggaagcagcgccagacacatggtcatgcagaaactg
ctgaggaaatcagagtctacggtgatggtgttacggaacatggtggggccggaggacatc
gatgatgacctggagggtgaggtgacagaggagtgcggcaagtttggtgccgtcaaccgg
gtcattatctaccaggagaagcagggggaggaggaggatgccgagatcatcgtcaagatc
tttgtggagttctccatggtctcagagatgaacaaggccatccaggcgctcaacgaccgc
tggtttgggggtcgcaaggtcattgcggaggtctacgaccaagagcgcttcaacagtagc
gacctctccgcataa

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