Coregonus clupeaformis (lake whitefish): 121569981
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Entry
121569981 CDS
T08357
Name
(RefSeq) COP9 signalosome complex subunit 1 isoform X1
KO
K12175
COP9 signalosome complex subunit 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569981
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
121569981
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GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
TPR_11
GARP
TPR_1
DUF7014
Motif
Other DBs
NCBI-GeneID:
121569981
NCBI-ProteinID:
XP_041737314
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Position
7:65540989..65562674
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AA seq
555 aa
AA seq
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MPLPVQVFNFQVSSVSELEVAAEQAQDSERDREKSRASSSASEPPCPSHSSRPNLLLPFT
AGDYVLSSSLSACSLLPEGAVEPMQIDADPQEDQQNAPDINYVVENPTLDLEQFASSYSG
LMRIERLQFIAEHCPQLRAEALKMALSFVQRTFNVDVYEEIHRRLTDATRQVQGVPDAVP
EGPVAPPLLDTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGD
LSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVHSYVSKAESTPEIAEQRGE
RDSQNQSVLTKLKCAAGLAELASRKYKPAAKCFLQASFDHCDFPELLSPSNVAVYGGMCA
LATFDRQELQKNIISSSSFKLFLELEPQVRDIIFKFYESKYASCLKLLDEMKDTLLLDLY
LAPHVRTLYTQIRNRALIQYFSPYVSADMTKMSQSFNTTVLALEDELTQLILEGLINARI
DSHSKILYARDVDQRGHTFQKSVHMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGE
LTTANSQTTRMSSTM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcccgtgcaggtctttaactttcaggtcagctcagtgtcagagctggaggtt
gccgcagaacaagctcaggacagcgaaagagacagggagaagagtagggcctctagctca
gcctcagagcctccctgtccctcccatagcagcagacccaatctgctcttaccgttcact
gcaggggactacgtcctcagctccagcctctcagcatgctccctgctccctgagggggct
gtggagccgatgcagatcgatgctgacccccaggaagaccagcagaatgctccagacatc
aactatgtggtggaaaaccccacactggacctggagcagtttgcgtccagctacagtggt
ctgatgcgtattgagagactgcagttcatagcagaacactgtccccagctccgtgccgag
gccctgaagatggcgctgtccttcgtccagaggaccttcaacgtagacgtgtacgaggag
atccaccgcagactcaccgacgccacacgacaggtgcagggtgtccctgacgcggtgcct
gaagggccggtggcgccccctctcctggacacagcctgggcagagagcaccaggaaaaag
gccctgctcaaactggagaagctggacactgacctcaagaactacaagggaaactccatc
aaagagagcatcaggcggggtcatgatgacctaggggaccactatttagactgtggcgat
cttagcaacgccctcaagtgctacagccgagcccgagactactgcactagcgccaagcat
gtcatcaacatgtgccttaacgtcatcaaggttagcgtttacctccagaactggtcccat
gtacatagctacgtcagcaaggcagaatccactccggagatagctgagcaacgaggagag
agagacagtcagaaccaatctgtcctcaccaaactaaaatgtgctgcgggtttggcagag
ctggcctctagaaagtacaaaccggccgccaagtgcttcctccaggcttcgtttgaccac
tgcgacttcccagagctcctgtcccccagtaatgtagcggtgtacggagggatgtgtgcc
ctggccaccttcgacagacaggaactacagaagaacatcatctccagcagttcctttaag
ttgtttttagagttggagccccaggtacgtgacataatcttcaagttttacgaatcgaag
tacgcctcctgtctgaaactactggacgagatgaaggatacccttctattggacctgtac
ctggccccccacgtcagaacactgtacacacagatcagaaacagagcccttatacagtac
ttcagcccgtacgtgtctgcagacatgactaagatgtcccagtccttcaacaccacagtg
ttagctctggaggatgaactgacccagctcatactggagggactcatcaacgcacgtata
gactcacacagcaagatcctgtatgcgagggacgtggaccagaggggccatacgtttcag
aagtctgtccacatgggcaaggagttccagagacgagccaaagccatgatcctcagagct
gccgtgctacgcaaccagatacacgtcaagtcccctcctagagaaggcagccagggggag
ctgacaacagccaacagccaaacaacccggatgagcagcaccatgtga
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