Coregonus clupeaformis (lake whitefish): 121569985
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Entry
121569985 CDS
T08357
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like
KO
K17908
autophagy-related protein 18
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04136
Autophagy - other
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121569985
04136 Autophagy - other
121569985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121569985
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121569985
Membrane trafficking [BR:
cclu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
121569985
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121569985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_HPS5
BCAS3_WD40
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
RMC1_N
EIF3I
Motif
Other DBs
NCBI-GeneID:
121569985
NCBI-ProteinID:
XP_041737324
LinkDB
All DBs
Position
7:complement(65464133..65489956)
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AA seq
463 aa
AA seq
DB search
METGEGADGPSGPGEPGAGPGTDLAGLGCASFNQDSTSLAVGTKTGYKLFSVTSVDKLDC
IYESETPDVYIVERLFSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNHILSVRLNRQ
RLVVCLEESVYIHNIKDMKLLKTLLSTPSNPSGLCALSINHSNSYLAYPGSSTIGEIIVY
DANNLSTVTMIPAHDSPLAALTFNASGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKR
YVNISSLSFSPDAQFLCASSNTETVHIFKLEQHGPSGEEECPTWGSYVGKMFSAASSYLP
AQVSGVMSQERAFATVRLLVAGQRNVCTLATIQKLPRLLVASSDGQLFIYNVDPQDGGEC
VLAQKHRLFGEDEDKEEGVESEGSEVTVPVQACPSYAATVAIPTTGPVTTTLTGYSEDGG
AKKGEVIPEHEFAAGPVCLDDENEFPPINWCRDGTRGGQWRRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggagagggagcagacggtcctagcggaccgggtgaaccgggagccgggccg
gggacggatctggcggggcttggctgcgcctctttcaaccaggactccacgtcattggca
gtgggaaccaagacaggctataagctgttctctgtgacctcagtggacaaactggactgc
atctacgagagcgagaccccagatgtgtacatcgttgagcggttgttctccagcagtctg
gtggtggtggttagtctctccatgccccgacgtatgaacgtctaccacttcaagaaggga
acggagatctgcaactacagctacagtaaccacatcctctctgtcagactcaacagacag
aggctggtggtgtgtctggaggagtcagtctacatacacaacatcaaagacatgaagctg
ctgaagaccctactcagcacgccctccaacccctcaggtctgtgtgctctgtccatcaac
cattccaactcctacctggcctacccaggcagctccaccatcggagagatcatagtttat
gacgccaacaacctgagcactgtgacaatgatcccggcccatgacagtcccctggctgct
ctcaccttcaacgcatcaggcaccaagctggccagcgcctcggagaggggtactgtaatc
cgtgtgttctccatcccagagggacagcgtctgtttgagttccgcagagggatgaagagg
tacgtcaacatcagttccctgtccttcagtcctgacgcccagttcctctgtgcctccagc
aacactgagaccgtacacatcttcaaactggaacagcatggacccagtggagaggaggag
tgtcctacctggggatcatacgtagggaagatgttctctgcagccagcagctacctccca
gcccaggtgtctggagtgatgagtcaggaaagagccttcgccactgtacgcctcctagtg
gccgggcagaggaacgtctgtaccctcgccacgatccagaagcttcctcgtctgctggtg
gcctcctccgacggacagctgttcatctataacgtagaccctcaggacggaggagagtgt
gtcctggctcagaaacacaggttgtttggtgaagatgaggacaaggaggagggggtggag
tcagaagggtcagaggtcacggtgcccgtccaggcatgtccatcatacgccgccactgtt
gccataccaaccaccggcccagtcactaccacgctcacaggttactctgaggatggtggg
gctaagaaaggcgaggtgatcccagaacatgagtttgccgcgggtcccgtctgtctagat
gatgagaatgagtttcctccaataaattggtgccgcgacggaactcgaggtggccagtgg
cgccgtctgtga
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