Coregonus clupeaformis (lake whitefish): 121569994
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Entry
121569994 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: periplakin-like
KO
K10386
periplakin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121569994
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121569994
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121569994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Spectrin
SR_plectin_7
ERM_helical
Plectin
Motif
Other DBs
NCBI-GeneID:
121569994
NCBI-ProteinID:
XP_041737346
LinkDB
All DBs
Position
7:65243917..65270345
Genome browser
AA seq
1756 aa
AA seq
DB search
MFKKKPSKNSVTITPTKKAPSSELSALIEKLQKNADKVEKLIYETEQNLNKDVSKINEGK
QPLYQDDTNKRILNSLELLQGLDEDAVDAKRLQHPQAEMIEQDMKQLRERLSKLREDHDR
IYHLTRSEGLPSVNWGKIIDEKQVNLKNKGFGQDLPTIENEVEEHNIFHSEVEALAPHIS
ASDNKDNASGLQLNYNKLLASSSARQRHLLSLRDYMQRCTNELYWMDQQAGERINYDWSD
TNLDFPARQRQYENFISKCLESKEATVTQLNDDGDKLISTNHPGKNVIEAHMEAVHADWK
EYLNLLICEENHLKHMDEYHKFHKEARDTQDLLKRLETEVNQKYKPEFKDMYQMESLIRD
LDDQAKAMDHFDERVMALEKRSLQVLPLQFRRNTPQKLLPVEALCEFDTDEGQILRGERY
TLLSNKGPKWEVKDAAGRKLTAPGACFMIPPTDPESVSISNNLATQQKGIKMKVSGSKTT
LVKRLEELKKDCTAGSDKDEQQCRQLMAGLDKVTSDLDKQEKAIYARVRPPLEHTRPLQD
SADRLQDMKDIAAVVRKIEPEKSSKVREAEKFLTSNPKCASAPQLNGKVNEANNKYDKIN
LLLKCSEDKLQNSNRLENSLQNGKTLLSSYENKLAREEVAPADISSLEMTQRQLADIASE
LKTKRSAVTETEANLRAAKGSCDTMATKLQEHCPDIERQEGEVQKLNKRYDNLNRQIDTR
TQSLQRAKMSYNNYRSDYDNLNSWLSRVPNYEPTEKDNLSQVETKLVNQKNLLSDIKKKE
SDLNNVSKNAQLYQQAVKEYENDTEMFKSILDLEDGLVPQTYKRSRLESPALRVKEEESA
IEAKFTEVNAVNKQRLANLQFAQGLMNQQSDVIVCNNVQQVKSAAPGEEAWRIESQLKDE
IQRREQLEKDLEKIQTDIYMLEGQKPEDTVVKKEIIKKVPDPTLVDEVHNVRQKLSDETR
ATRAMDNELEALRLKLRGIETEIKEGAQQYTVKEVLRIERDRGQEEEVRRLREELEELRR
KKTIKDNEVVQITKQVTLLAQQKSKEQEVITEEEVIKVQNDPQLESEYRILLDRKQKEQE
NRKQLEDELRFLQDKLRRLEKEKSMAEEKISIKEVLKVEKDIAFEREVENLRRQHEDEKA
KHRSSQRERADLQRKISSLEEEKSRVIVQEKVREIVRPDPKAEAEVANLRMELVEHQRRY
RDTDQQLKSHQDELKMLRNRGPQIEVKEIIKEVIKYKTDPQTERELEKLRNEIVDKTHQT
EKSEMEIRQLRDEIKRWKDTKPQVQIKEVVNEVLEYKENPKTKEEIEILKRKLADEQKKR
LDLERERSANEEKIRLRKIDLSQVREKLVQQEVVKMEEDPLLRSECNTFTQSINNEQKQR
ETLKVELYQLQRQKADLDAQLEELERERRARRDAELEIQRLRVRLNEMEVMDKENRERVT
VKQMVVLQQDPQQEKEHSILKLQVEEERHKRTLLEKELNVLLQQQVTLERIEVKEKVVRT
ETIQVEKDPEAEMEIEKMTRTLDQEKRRRLELDQELGSLKSRLSDMEFTNTKSSKELDYI
RDESSRLQQENQRLQNDIRRLQSEIQITSTETRSISNSAPMENGKNLELRLDSLQXELAE
LRAITRQKDEEIEKLQKGLAAIQIKREQRESHLRRSIVVIDPDSGKEMRPEEAYKLGLID
WKMFVNLQSQECDWEEISVKGPKGESSVLHDRKSVKKFSIEDALRAGNITNRQLQQYHNK
EITIQEFGVMVSGKTK
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaaaccttcgaagaatagcgtgaccatcacgccaacgaaaaaggcgccc
tcctctgagctgtctgctctgattgagaagctgcagaagaatgctgacaaggtggagaag
ctcatctatgagacggagcagaacctcaacaaggatgtgagtaagatcaacgagggcaag
cagcctctgtaccaggacgacaccaacaagcgcatcctgaactctctggagctgctgcaa
ggcctggatgaggatgctgtcgacgcaaaacgcctgcagcacccccaggctgagatgatc
gagcaggatatgaagcagctgagagagagactgagtaagctgagagaggaccatgaccgc
atctaccacctgacccgctctgagggcctgccgagcgtcaactggggcaagatcatagac
gagaaacaggtcaacctgaagaacaaaggttttggtcaggacctgccgaccatagagaat
gaggtggaggaacacaacatctttcacagtgaggtggaggccctggcccctcacatctca
gccagcgacaacaaggacaatgccagtggcctccagctgaattacaacaagctcctggcc
agttccagtgctcgacagcgccacctgctgagcctgcgtgactacatgcagcgctgcacc
aatgagctgtactggatggaccagcaggcaggggagaggatcaactatgactggagcgac
accaacctggacttccctgctcgtcagagacagtatgagaacttcataagtaagtgtctc
gagtccaaggaggccactgtcacgcagctgaatgatgatggagataaactaatctctacc
aaccatcctggcaagaatgtcattgaggctcacatggaggcagtgcatgctgactggaag
gagtacctgaacctgctcatctgtgaagagaaccacctgaaacacatggacgagtaccac
aagttccacaaagaggccagggacacccaggatcttctgaagagactggaaacagaggtc
aaccagaagtacaaaccagagttcaaggacatgtaccagatggagagcctcatcagagac
ctggacgaccaggcgaaggccatggaccactttgatgagcgtgtgatggctctggagaag
cgcagcctacaggttctccctctccagttccgtaggaacacccctcagaagctgctcccc
gtcgaggcgctgtgtgagttcgacactgacgagggtcagatcctgcgtggagagaggtac
accctcctgagtaacaaggggcccaagtgggaggtgaaggacgcggccgggcgtaaactg
accgctccaggggcctgcttcatgatcccccccacagacccagagtctgtctccatctcc
aacaatctggccacccagcagaagggtattaagatgaaggtgtctggcagtaagaccacc
ctggtcaaacgcctggaggaactgaagaaagactgcaccgctggctctgacaaggatgag
cagcagtgtcgccagctgatggccggtctggacaaggtgaccagtgatctggacaaacag
gagaaggccatctacgctcgagtacgccccccgctggagcacaccaggccactgcaggac
agcgctgaccgcctgcaggacatgaaggacattgcggccgtggttcgtaagatcgagccg
gagaagtcgtccaaggtgagggaggctgagaagttcctgacctctaaccctaaatgtgcc
agcgcccctcagctgaacggcaaggtgaacgaggccaacaataaatatgacaagatcaac
ctgctgctcaagtgctcagaggacaagcttcagaattccaaccgcctggagaactccctt
caaaacgggaaaactttattgtccagctatgagaacaagctggccagggaggaagtcgcc
ccagcagacatctcgtctctggagatgacacagcgccaactggctgatattgcatcagag
ctgaagaccaagaggtccgcggtgacggagacggaggctaacctgcgtgcggccaaaggc
agctgtgacaccatggcaaccaagctgcaggagcactgccctgacatcgagaggcaggag
ggcgaggttcagaagctgaacaaacgctacgacaacctcaacaggcagatcgacaccaga
actcagagcctgcagagggctaagatgtcgtacaacaactaccgcagtgattacgacaac
ctgaacagctggctgtcccgcgtgccaaactatgagccaactgagaaggacaacctcagt
caggtggaaaccaagctggtaaaccagaagaacctgctctccgacattaaaaagaaggag
tctgacttgaacaacgtatcaaaaaatgcccaactttaccagcaagccgtcaaggaatat
gagaatgatactgaaatgttcaagtctattctggaccttgaagacgggctggtccctcag
acctacaagagaagcagactggagtcccctgcactcagggtcaaggaagaggaatctgcc
attgaagcgaaattcaccgaagtgaatgcagttaacaagcaaaggctggcgaatctgcag
tttgcccaaggccttatgaatcagcaatcagacgtgatcgtctgcaacaatgtccagcaa
gtcaaatctgccgctcccggagaagaagcctggaggatcgagagtcaactgaaggacgag
atccagaggagggagcagctggagaaggatctagagaaaatccagacagacatctacatg
ttggagggccagaagccggaggacaccgtcgtcaagaaggagatcatcaagaaggttccg
gatcctactctggtcgacgaggtccacaatgtccgtcagaagctgtcggacgaaacccgg
gccacccgggccatggacaacgagctggaggcactgaggctgaagctgcgcggcatcgaa
acagagatcaaagaaggagcacagcagtacaccgtgaaggaggtgctgcgtatcgagagg
gaccgcggccaggaggaagaggtgaggaggctcagggaggagctggaggagctgaggagg
aagaagaccatcaaggacaatgaggtggtccagatcacgaagcaggtgacgctcctggcg
cagcagaagtccaaggagcaggaggtgatcacagaggaggaggtgattaaagtgcagaac
gacccgcagctggagagcgagtaccgcatcctcctggacaggaagcagaaggagcaggag
aacaggaagcaactggaggacgagctgcgcttcctccaggacaagctccgcaggctggag
aaggagaagtccatggccgaggagaagatctccatcaaggaggtgctgaaggtggagaag
gatatcgccttcgagagggaggtagagaacctcaggaggcagcacgaggatgagaaggcc
aagcaccggtcttcccaaagggagcgcgccgacctccagaggaagatctccagcctagag
gaggaaaagtcaagggtcatagttcaggagaaggtgagggagatcgtcaggccagacccc
aaggctgaggctgaagtggccaacctgcgcatggaactggtagagcaccagaggaggtac
agagacaccgaccagcagctgaagtcccaccaggacgagctgaagatgctgagaaacaga
ggtccgcagatcgaggtcaaggagatcatcaaggaagtcatcaagtacaagacggacccg
cagaccgagagggagctggagaagctccgcaatgagattgtggacaagacgcaccagacg
gagaagtcagagatggagatcaggcagctgagggacgagattaagcggtggaaggacacc
aagccccaggtgcaaattaaagaggtggttaacgaggtgctggagtacaaagaaaacccc
aagaccaaggaggagattgagatcctgaagaggaagctggcggacgagcagaagaaacgc
ctggacctggagagggagcgatcagctaatgaggagaagatccggctaaggaagatcgac
ctgtcccaggtcagggagaagttggtccagcaggaggtggttaagatggaggaggaccca
ttactgaggtcagagtgcaacaccttcacgcagagcatcaacaatgaacagaagcagagg
gagaccctgaaagtggagctctaccaacttcagaggcagaaggccgacctggacgcacag
ctggaggagctggagcgagaacgtcgggccaggcgcgatgcagagctggagatccagagg
ctgagggtcaggctgaatgagatggaggtcatggacaaggagaacagggagagagtcaca
gtgaaacagatggtggttctccagcaggacccccagcaagagaaagagcactctatcctc
aagctgcaggtggaggaggagagacacaagcgtaccctgctggagaaggagctgaatgtc
ctgctccagcagcaggtcaccctggagaggattgaggtgaaggagaaggtggtgcgcacc
gagaccatccaggtggagaaggaccctgaggccgagatggagatcgagaagatgacaagg
acgctggaccaggagaagaggaggaggctggagctggaccaggagctgggcagcctcaag
tcccgcctgtccgacatggagttcaccaacaccaagtcgtccaaggagctggactacatc
cgcgacgagagcagccgcctccagcaggagaaccagaggctacagaacgacatccgcagg
ctgcagtccgagatccagatcacctccacggagacccggagcatctccaactcggccccc
atggagaacgggaagaacctggagctgaggctggactcgctgcagngggagctggccgaa
ctgagggccatcaccaggcagaaggatgaggagatcgagaagctgcagaagggcctggcg
gcgatccagatcaagagggagcagagggagagtcacctgaggagatccatcgtggtcatc
gaccccgactcgggcaaggagatgcggccggaggaggcctacaagctgggactgattgac
tggaagatgtttgtgaacctccagagccaggagtgcgactgggaggagatcagcgtcaag
ggccccaagggggagtcctctgttctccacgacaggaagtctgtgaaaaagttctccatt
gaagacgccctgagggctgggaatatcaccaaccgccagctgcagcagtaccataacaaa
gagatcaccatacaggagttcggggtcatggtgtcgggaaagaccaagtga
DBGET
integrated database retrieval system
