Coregonus clupeaformis (lake whitefish): 121570000
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Entry
121570000 CDS
T08357
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
cclu04144
Endocytosis
cclu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121570000
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121570000
04145 Phagosome
121570000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121570000
Membrane trafficking [BR:
cclu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
121570000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
ELMO_ARM
UIM
FYVE_CARP1-2
UIM_2
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
121570000
NCBI-ProteinID:
XP_041737363
LinkDB
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Position
7:64392178..64408112
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AA seq
773 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAIGAIKKKLMDKNPHV
ALYGLEVLESVVKNCGQTVHDEVACKTTMEELKDLLKTEPNVRNKILYLIQAWAHAFRNE
PKYKVVQDTYQIMKVEGNVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFELLNKKAEGGKPVGTSTSVAPGPAEL
PPEYLTSPLSQQSQVVVQETVPPKRDEAALQEEEELQLAIALSQSEAEEKERMRQKNSYG
VYPKADPAPVTSSAPPVTSLYSSPVNSSAPSAEDVDPELARYLNRTYWEKKQEEARKSPT
PSAPAPVPLAAEPLPISQPQPVETLTPLPAQVVMAPPPVNIVEQQYQNGESEENHDAFLK
ALQNSVTTFLNRMKSNHMRGRSITNDSAVLSLFQSINTMHPQLLEILNQLDEKRLYYEGL
QDKLAQVRDARAALNALRDEHREKLRRAAEEAERQRQIQLAQKLDIMRQKKQEYLEMQRQ
LAIQRLQEQEKERQMRLEQQKHTIQMRAQMPAFPMSYPQMQSLPPNVAGGVVYGQPGGPP
NYPGTFSPSGSVEGSPMHNVYMDQSGPGRYQAMPPDPNMYMYQPAGTNGQPAPPGQAPPT
TSPAYSNYQPTPTQGYQQNVVSQAQSLPPMSQPPPTNAMSYVAYPPPYAMQNMMAALPGQ
DPNMPPQQPYMQGPGQQPMYQQMAPPGGPQQQVQQQQPPQVHPGSEAQLISFD
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggtggtggtacatttgagaggcttcttgataaagcgaccagtcagctgctg
ctggagacagactgggagtccatcctgcagatctgtgatctcattcgtcaaggggacacg
caggcgaagtatgccatcggtgccattaagaagaagctgatggataagaacccgcatgtg
gccctctatggtcttgaggtgttggagtcagtggtgaagaactgtggtcagacggtccat
gatgaggtggcctgtaaaaccaccatggaggagctgaaggatctactgaagactgagccc
aacgtgaggaataagatcctatacctgatccaggcatgggcccacgccttccgcaacgag
cccaaatacaaggtggttcaggacacgtaccagatcatgaaggtggagggtaacgtgttt
ccagagttcaaggagagtgatgccatgtttgcagcagagagagctccagattgggtggat
gcggaggagtgtcatcgctgcagggttcagtttggagtgatgactagaaagcaccactgc
agagcctgtggtcagatcttctgtgggaagtgttcctccaagtactccaccatccccaag
ttcggcattgagaaggaagtgcgtgtgtgtgagccctgcttcgagctgctcaacaagaaa
gctgaggggggtaaacccgtcgggacatccacctccgtggccccaggcccggcagagctt
cccccagagtacctgaccagccccctgtcccagcagtctcaggtagtggtccaggaaaca
gtgccccccaaacgggacgaggcggccctgcaggaggaggaggagcttcagctggccatc
gccctatcacagagcgaggctgaggagaaggagaggatgagacagaagaactcgtacggg
gtctaccccaaagctgaccccgccccagtcacctcgtcagccccgcccgtcacctctctc
tactcctctcctgtgaactcctctgctccctcagctgaagatgttgaccctgagctggct
cgctacctgaacagaacatactgggagaagaaacaggaagaggcacgcaagagtcccacg
ccctctgcccctgccccagtgccattggctgctgagcccctgccaatcagccagccccag
ccagtggaaactctcaccccactcccagcccaagtcgtcatggccccgcctccagtcaac
atagtggagcagcagtatcagaacggtgagtcggaggagaaccacgatgcgttcctgaag
gctctgcagaactcggtcaccaccttcctgaaccgtatgaagagtaaccacatgcgtggt
cgcagcatcaccaacgacagcgccgtgctctctctcttccagtccatcaacaccatgcac
ccccagctactggagatcctcaatcagctggacgagaagagattgtactacgagggtcta
caggacaagctggcccaggtgcgtgatgcgagagcggccctgaacgccctacgagacgag
cacagagagaagctgcgtcgtgctgcagaggaggcagaaagacagagacagatccagctg
gcccagaaactagacatcatgagacagaagaaacaggagtaccttgagatgcagcgtcag
ctggccatccagcgtctccaggagcaggagaaggagagacagatgaggctggagcaacag
aaacacaccatccagatgagagcccagatgcctgctttccccatgtcctacccacagatg
cagtctttgccccccaacgtggcaggaggggtggtgtacgggcagccggggggacccccc
aattacccaggcacctttagcccctcagggtcagtggaggggtcgcccatgcacaacgtc
tacatggaccagtctggaccaggacggtaccaggccatgccaccagaccccaacatgtac
atgtaccagccagcaggaaccaatgggcagcctgcaccccctggccaggccccgcccacc
actagccctgcctactctaactaccagcccacacccacacagggataccagcagaacgtg
gtttcccaggcccagtctctgccccccatgtcccagcctccccccactaacgccatgtcc
tacgtggcctaccctccaccctatgccatgcagaatatgatggcagccctacctgggcag
gaccctaacatgcccccacaacaaccctacatgcagggcccaggacaacagcccatgtac
caacagatggctccccctggtggcccccagcagcaggttcagcagcagcagcctccgcag
gtccatccaggcagcgaggcacagctcatctctttcgactga
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