Coregonus clupeaformis (lake whitefish): 121570066
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Entry
121570066 CDS
T08357
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121570066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121570066
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121570066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
TNFAIP8
Motif
Other DBs
NCBI-GeneID:
121570066
NCBI-ProteinID:
XP_041737466
LinkDB
All DBs
Position
1:47491330..47619463
Genome browser
AA seq
1859 aa
AA seq
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MVDKNIYIVQGEICTVVGAIKRNSRWNTHTPLDEEQDPLLNSFSHLKEILNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEVMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKLKMRAGGMSESSKWKKQKRSPRPPRHM
VRSASGGLEQAPTTTLSNNNLSGGVPFIEQGSLSVSDSVASSMSSPTDSGLDTCSKTTSR
EDLTDLDQSSSADTTPSTEPGRLDTQSEGRQVERAKSASVESIPEVLEDGDSVTEQSDSA
SLHDMDYVNPRGVRFTPQQTQRDGEDGAALVPYGLPCLRELFRFLISLTNPHDRHNTEAM
MHMGLQLLTVALEAAHIAPYQSLLGLVKDELCRHLFQLLSVDRMNLYAASIRACFLLFES
MRGHLKFQLEMYLKKLMDIITSENMKMPYEIKEMALEALVQLLRIPSFVTELYINHDCDF
YCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNSTAQQDQS
AETVLAEGEGSTNDRTDTTTDASRQVNSANGQNVPEADSVPLPPTSGHLMAEKMRLGRQD
QEETEPAEKKEPKKPQRFSSCLPDSQELLDIRSKKKLLNSGTEQFNQKPKKGIQFLQEKG
LLSSPMDNNEVAQWLRENPRLDKKQIGEFISDRKHMELLDSFVNTFTFRGLRIDEALRLY
LEAFRLPGEAPVIHRLLETFTDTWHKVNGSPFMTNDAGFALAYAVIMLNTDQHNNNVRKQ
NIPMTIEQFKKNLKGVNGNTDFDQDMLEDIYNAIKNDEIVMPDEQSGLVKENYVWSVLLH
RGATSEGVFLHVPAGSYDHDLFTLTWGPTIAALSYVFDKSLDDTIIQKAIAGFRKCAMIS
AHYGFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNGKAQIAAKTVFHLAHRHGDILRE
GWKNIMDSMLQLFRAELLPKAMVEVEDFVEPNGTISLQREETPSNRGESAVLSFVNWLTL
SGAEQSGQRGPSTENQEAKQAAMFCIKQCDPEKLITESKFLQLESLQELMKALISVTPDE
ETYDEEDAAFCLEMLLRIVMENRDRVSCVWQTVRDHLCHLCVQATESCFLVERAVVGLIR
LAIRLLRREDISSQVLLSLHLLLMMKPHVLARVSREVAYGLHELLKTNAANIHCTDDWFT
LFSLIECIGAGIKPPASFQVTSTSPDIDTGAQSDSELSFHHPSEVSLDRGYTSDSEVYTE
HGKSRMPRSVTDVDVASSGWLVVGKDDLDISKVAASGSKTLLNPLVNQYSLTLGQDMGFH
DTKSLIKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTYEKKKNHKYDSQ
KSRVRRKPREKEGTSRRAKASSQRPSRSHSDDEEDEGVPASYHTVSLQVSQDLLDLMHTL
HTRASSIYSSWAEEQRHLEPAGKKIEADSQTLWTSCWCPLLQGIAWLCCDARRQVRMQAL
TYLQRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRACTMLSK
VFLQHLSPLLSLSTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAGIFH
SADSRTGYSDLWEITWERIDCFLPNLREELFKQTVIPQPDPAPSSPVELAQPAAPGPPAS
PPSAQAPSPVPVPAAPTEPKTSSRPVSPQDPPPPSTNGIDRSSPVPPSTPPMPTPVKMSP
QISRPLIQSPTSQSPLILQPLASHLQVGGVPPMSLPIILNPALIEASSPVPLLPAPPPH
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatatacattgttcaaggggaaatctgtactgttgtaggtgccatc
aagaggaattcaaggtggaatacccatactcctttggatgaggaacaagatccattgctt
aacagcttcagccacctgaaggagattctcaacaatataaaagagctatcagatgtggag
cccaacgtattcctgcggcccttcctggaggtggtacgatctgaagacaccaccggacca
atcacaggcctggccctcacctctgtcaacaagttcctttcctacggcctcatagatgct
aaccacgaggcggcggcggaggccatcgagaacatggcggacgccgtcacacacgccaga
ttcgtagggacggaccccgccagcgatgaagtagtgctcatgaaaatcctacaggtcctg
aggactttgctgctcacgcccgtaggagcccacctgaccaacgagtctgtgtgtgaggtc
atgcagtcgtgtttccgcatctgcttcgagatgcgcctcagcgagctcctgaggaaatca
gccgaacacacactggtggacatggtgcagctgctgttttccagactaccccagtttaaa
gaggaggccaaaagttttgtgggagccaacatgaagaagctgaagatgcgtgctggtggg
atgagtgagtcatcaaagtggaagaagcagaaacgctcgccccggcccccccgtcacatg
gttagaagcgcctcgggcgggttggagcaggcccctaccaccaccctcagcaacaacaac
ctctctggtggtgtcccgttcatcgagcagggtagtttgtctgtctcggacagcgtggcc
tcctccatgtccagccccacagacagcggcctggacacctgctccaagaccacctccaga
gaggacctgacagacctggaccagagcagctccgctgacaccaccccttccacagagcct
ggacgcctggacactcagtctgaggggaggcaggtggagcgtgccaagtcagcctcggtg
gagtccattcctgaggtcctagaggacggagactctgtgacggagcagtcggactcagcc
tcattacatgacatggactacgtcaaccccagaggagtccgcttcacaccacagcaaaca
cagagagacggtgaggatggtgcggctctcgtcccctacggcctgccctgtctgcgggag
ctcttccgcttcctcatctcgctgaccaacccccatgaccgccacaacacggaagccatg
atgcacatgggcctgcagctgctgaccgtggctctggaggcggcccacatagccccctac
cagtcactgctgggcctggtcaaagacgagctttgcagacacctcttccagttgctaagt
gtggaccgtatgaacctgtatgccgcctccatacgagcgtgcttcttgctctttgagagc
atgcgaggacatttgaagtttcagcttgagatgtatctgaagaagctgatggacatcatc
acttcagagaacatgaagatgccctatgagattaaggagatggccctggaggccctggtg
cagctcttgaggatccccagcttcgtcaccgagctctacatcaaccacgactgtgacttc
tactgctccaacctgtttgaagacctcaccaagctgctctccaagaatgccttccctgtg
tccggacagctctacacaacccacctcctctcactagaggccctactgacggtgattgac
agcactgaggcccactgccaggccaaggtgctcaacagcaccgctcagcaggaccaatca
gcagaaactgtgttagcagaaggggagggctcaaccaatgaccgtacagacacaaccacg
gatgcgagcaggcaggtgaacagtgccaatggtcagaatgttccagaggctgacagcgtg
cccctaccacctaccagtgggcacctgatggcagagaagatgagactgggcagacaagac
caggaggagacagaaccagctgaaaagaaagaaccgaaaaagccacaacgcttctcgtct
tgtttacctgattctcaagagctgttggacatcagaagtaaaaagaagctgctgaacagc
ggcacagaacagttcaaccagaagcctaagaagggcatccagttcctgcaggagaagggt
ctgctcagcagccccatggacaacaacgaggtggcccagtggctccgggagaacccccgc
ctcgacaagaagcagatcggagagttcatcagtgaccgcaaacacatggagctactggac
agcttcgtcaacacgttcaccttccgagggctgcgtattgacgaggcgctgcgtctgtat
ctggaggccttcaggctgccaggagaggctccggtcatccatagacttttggaaaccttc
acagacacctggcataaagtgaacggctctcccttcatgaccaacgacgcaggcttcgcc
ttggcctacgctgtcatcatgctcaacacggaccagcacaacaacaacgtgcgcaagcag
aacatccccatgacaattgagcaattcaagaagaatctgaagggtgtgaatggaaataca
gacttcgatcaggatatgctggaggacatctacaatgcaatcaagaatgacgagatagtg
atgccagacgagcagtccggcctggtcaaggagaactatgtgtggagcgtgctgctccac
cggggggccacctccgagggggtcttcctccatgtgcccgccggcagctacgaccacgac
ctgttcaccttgacctgggggcccaccatcgcagccctctcctacgtcttcgacaagagc
ctggacgacacaatcatccagaaggctatcgctggcttcaggaaatgtgccatgatatca
gctcattatggattcagtgacgtttttgataatttgatcatctccctctgcaagtttaca
acactcagcagtgagtcggtggagaacctgcccacggtgtttgggagtaacgggaaggcc
cagatagcggcgaagacggtattccacctggcccaccggcacggtgacatcctgagggag
ggctggaagaacatcatggactccatgctgcagctgttcagagctgagctgctgcccaag
gccatggtggaggtggaggattttgtggagccaaatggaacgatttcccttcaaagagaa
gagacaccgtcaaatcggggtgagtctgcggtgttgagctttgtgaactggctgactctg
agtggagcggagcagtctggtcaacgtgggccctctactgagaaccaggaggccaagcag
gcagccatgttctgtatcaagcaatgtgacccagagaagctgatcacagagagtaaattc
ctgcagctggagtctctacaggagctgatgaaggctctgatctcagtcacacctgatgag
gagacgtatgatgaggaggatgctgcattctgcctggagatgctgctacgcatagtcatg
gagaacagggaccgcgtgtcgtgtgtatggcagacggtgcgggatcacctgtgccacctg
tgtgtccaggctacagagagctgcttcctggtggagagggccgtggtgggcctcatcaga
ctggccatccgcctgctgcgcagagaggacatcagctcccaggtgctgctgtccctgcat
ctcctgctaatgatgaaaccacacgtcctggcccgggttagccgggaggtggcctatggc
ctccatgagctgctcaagaccaatgctgccaacatccactgcacagacgactggttcacc
cttttctccctaatcgagtgcatcggggccgggatcaaaccccctgcctccttccaggtc
acctccactagcccagacatcgacacaggtgcccagtcggacagtgagctgtcgttccac
caccctagtgaggtgagtctggaccgggggtacacctcagactcagaggtctacacggag
cacggaaagtccaggatgccccgctctgtcactgacgtggacgtggccagcagcggatgg
ctggtggttgggaaagatgacctggacatcagcaaggtagcggcctctggctccaagacc
ctgctaaaccctctagtgaaccagtacagcctgaccctgggccaagacatgggcttccac
gacaccaagtctctcatcaagtgtgtggagtccctctccttcatagtacgcgacgctgca
cacgtcacccccgagaactttgagctgtgtgtcaaagccatccgggtgtttgtggaggcc
agcctaaacggaggctataggacgtatgagaagaagaagaaccacaagtacgactcccag
aagtcccgtgtgaggaggaagccccgggagaaggaagggacatcccgccgcgccaaggcc
tccagccagaggccctcccgttcccatagcgatgacgaggaggacgagggggtccctgcc
agctaccacacggtgtcattacaggttagtcaggacctgttagatctgatgcacacgctg
catacgagggcctccagcatatacagctcctgggcagaggaacagcgccacctggagcct
gcagggaagaagattgaggctgactcccagacactttggaccagctgctggtgcccactg
ctccaagggatagcctggctgtgctgcgacgccaggcggcaggtgcgaatgcaggccttg
acctacctccagagggcactgttggtccatgacctgcagacactagatgctgtggagtgg
gagtcctgcttcaacaaggtgctgttccccctgctgaccaagcttctggacaatattagc
cctgcagacgtgggaggcatggaggagaccaggatgagggcttgcaccatgctgtcaaag
gtgttcctacagcacctctctcccctgttgtctctgtccaccttcgctgccctgtggctc
accatcctggacttcatggacaagtacatgcacgctggctccagtgacctgctgctggag
gccatcccagagtctctgaagaacatgctgctggtgatggacacagcaggaatcttccac
agcgctgactctcgtacgggatactctgacctgtgggagatcacttgggaacgcatcgac
tgctttctgcctaacctccgggaagagctcttcaaacagacagtcataccacaaccagat
cctgctcctagttccccagtcgagcttgcccagccggctgcccccggccccccagcctcg
ccaccctcagcccaggccccatctcctgtgccagtgccagctgcccccacagagccaaag
acctccagcagaccagtgtcgcctcaagatcccccaccacctagtaccaacggaatagac
agatcatctccagtgcccccgtcgactccccccatgcccaccccagtgaagatgtccccc
cagatctctaggccactgatccagtcccccacgagtcagtcccccctcatcctgcagccc
ctggcctcccatctgcaggtggggggcgtgccccctatgtccctccccatcatcctcaac
cctgccctcattgaggccagctcccctgtccccctgctccccgcccccccgccccactga
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