Coregonus clupeaformis (lake whitefish): 121570096
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Entry
121570096 CDS
T08357
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121570096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121570096
03036 Chromosome and associated proteins [BR:
cclu03036
]
121570096
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121570096
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
121570096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
DUF7573
Motif
Other DBs
NCBI-GeneID:
121570096
NCBI-ProteinID:
XP_041737511
LinkDB
All DBs
Position
28
Genome browser
AA seq
684 aa
AA seq
DB search
MERLNEEAVRLSLLKRGLDSSSPAGSATSSERDELLSKRIKMEGHQAMERLKMLAYLKRK
DLAGMEGGGLGGVSGGGGGEVKGHGSSGGGAYEEKTNGSLRGQVVGAHGMVGKSGKENMG
EEPVDFSARRGDVDRERHTPSPDVIVLSDNEASSPRGPSQGEERLRAANLEMYEGKTGEE
RQKMIRALREELRLEEARLVLLKKLRQSQMQKENLVQKVPVVQNTASALQSGAIHGAQSM
SKMSGRPGHHTPEPQNHRTSQVGYSTTQGHSVIRSATNSSMSQMMMSQSRVIAPNPAQLQ
GQRLTQQKQGGMRSSTGSSNNAVSYQQSSTQQVAASLRSGSSSSSAIYMNLTHMQAAGAA
GGVSGVSGVGAVSPSATHSPGGTSVGSSMADTASSQAAAKLALRKQLEKTLLEIPPPKPP
APLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKLRLPSSMEPFSCAQCKTDFTPHWKQE
KGGRILCETCMSSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRIQLQAALATSSAQTVP
SVSKAESMSRHHTHRQAPQPQVTQSQASLQRGLSGSARGVLSNFAQASQLSVASSLLGMT
GKRSGQQGTSGHSRAQQQQQQQQQQQQHHDNRRQLYSIPGVNIAYLNPSNVGGHKGSSMA
DRQREYLLDMIPPRSISQSISGQK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggagcgactgaatgaggaggcggtgcggctgagcctgctgaagcgaggcttggactcc
tcctcgcctgcaggcagtgccactagcagtgagcgagacgagctgctctccaaacgcatc
aagatggagggccaccaggccatggagcgcctcaagatgctggcctatctgaaacgcaaa
gacctcgccggcatggaggggggagggttgggaggggtctcaggaggcgggggtggtgag
gtcaagggtcatgggtcttcagggggaggggcctatgaggagaagaccaatgggagcctc
cgtggtcaagttgtgggagcccatggcatggtgggaaagagcgggaaggagaacatgggc
gaggagccggtggatttcagcgcccggagaggtgacgtggacagggagcgacacacaccc
tcccctgatgtgattgtcctgtcagacaatgaggcgtccagtccaagagggcccagccaa
ggggaggaacgcctgagggcagcgaacctggagatgtatgagggtaagacaggggaggag
aggcagaagatgatcagggctctgagagaggagctgaggctggaggaggccaggctggtg
ctgctgaagaagctgaggcagagccagatgcagaaggagaacctggtgcagaaggtccct
gtggtccagaacacagcgtctgccctccagagtggtgccatccacggtgctcagagcatg
agcaagatgtctggccgccctggccaccacaccccagagccccagaaccatcgcacttca
caggtgggctacagcactacacagggtcactcagtgatcaggtcagccaccaacagctcc
atgtctcagatgatgatgtcacagagcagggtgatagcgcccaaccctgcccagctgcag
ggccagaggctgacacagcagaagcagggtggcatgcgctcctcaactggcagctctaac
aacgccgttagctaccagcagtcttccacccagcaggtggcagcttctctgcgctctggc
tcctcctcctcctcggccatctacatgaacctgacccacatgcaggcggccggagccgcg
ggaggggtcagtggggtgtcgggggtgggtgcggtcagcccctcagccacacacagccca
ggggggacatcggtgggctcctccatggcagacacagccagcagccaggcggccgccaag
ctggccctgaggaagcagctggagaaaaccctgctggagatcccgcctcccaagccgccg
gcgccactcctccacttcctgccgtcagcggccaacagcgagtttatctacatggtgggc
ctggaggaggttgtgcagagtgtcattgacagtcagggtaaactgcgtttgccctcctcc
atggagcccttctcgtgtgcccagtgcaagacggacttcacccctcactggaagcaggag
aagggtgggcgcatactctgcgagacctgtatgtcgtccaatcagaagaaggcactgaag
gccgagcacaccaataggctgaagaacgccttcgtcaaggctctacagcaggagcaggag
attgagcagagaatccagttgcaagccgctcttgccaccagttcagctcaaactgttcca
agcgtcagtaaggctgagtctatgagcagacatcacacacacagacaggcgcctcagccc
caggtgacccagtcccaggcctccctccaacggggtctgtccggctcggcccgaggcgtc
ctgtccaactttgcccaggcctcccagctctcggtggccagcagcctgctgggcatgact
ggaaagcgcagtggacagcagggcactagtgggcacagccgggcacagcaacagcagcag
cagcagcaacagcagcaacagcatcacgacaaccgccgccagctctacagcatccctggg
gtgaacatcgcctacctgaacccaagcaacgtgggcggccacaaggggtccagcatggct
gaccgccaaagggagtacctgctggacatgatcccgcctcgctccatatcccagtccatc
agcggacagaaatga
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