Coregonus clupeaformis (lake whitefish): 121570125
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Entry
121570125 CDS
T08357
Name
(RefSeq) synaptic vesicular amine transporter
KO
K08155
MFS transporter, DHA1 family, solute carrier family 18 (vesicular amine transporter), member 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121570125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121570125
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC18: Vesicular amine transporter
121570125
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
121570125
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
S_4TM
Motif
Other DBs
NCBI-GeneID:
121570125
NCBI-ProteinID:
XP_041737554
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Position
1:complement(46946622..46978731)
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AA seq
523 aa
AA seq
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MGRLDTLREFNLLSWMREERQSRKLTLVIVFIALLLDNMLLTVVVPIIPSYLYTIDDAAA
NMAKNHTMVSPHTPSGTFQTIVSLYDNSVRVTSGGPMDSTPIPLGQTQAVSPSTSALTPH
NSTQPDCPKADDQLLNENVKVGLLFASKATVQLITNPFIGPLTNRIGYQIPMFAGFCIMF
LSTIMFAFSSSYTLLFLARSLQGVGSSCSSVAGMGMLASVYTDDEERGNAIGIALGGLAM
GVLVGPPFGSVMYEFVGKTAPFLILAVLAVLDGALQLFILQPSKVEPESQKGSSLWSLIK
DPYILIAAGSICFANMAIAMLEPALPIWMMETMCPRKWQLGVAFVPASISYLIGTNIFGV
LAHKMGRWLCSLIGMVLVGVSILCVPFAKDIYGLILPNFGVGFAIGMVDSSMMPIMGYLV
DLRHVSVYGTVYAIADVAFCMGFALGPSAGGAIAKSIGFPWLMTIIGIVDILFAPLCYFL
RSPPGREEKMAILMDSNCSMKTRSYSTQGNTEYEEMETEYDEY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggaagattagacactctgagagaatttaatttattgtcatggatgagagaggaaaga
caatcgaggaagttgaccctggtcatcgttttcatcgccttgctgctggataatatgctt
ctaacggtggtcgtccccatcatccccagctacctatacacaattgatgatgcagcagcc
aacatggccaagaatcacaccatggtctccccacacaccccttctggaaccttccagacc
attgtgtccctctatgacaactctgtcagggtaaccagcgggggcccaatggattccaca
cccatacccttgggtcagacgcaggcggtctctccttccacctcggctctcacaccccac
aactccacacagcctgactgccccaaagcagatgaccagctgctcaatgagaatgtgaaa
gtggggctactctttgcctccaaggccaccgtacagctcatcaccaacccctttattggg
cctctcaccaacagaataggataccagatccccatgtttgctgggttctgtattatgttc
ctgtcaaccattatgttcgccttctcatcgagctacactctgctgtttctggccagatcc
ctgcagggtgttggctcctcctgctcctccgtggctgggatggggatgcttgccagtgtg
tacacagatgacgaggagaggggaaatgccattgggatagccctgggtggtctcgccatg
ggtgtgctggtgggcccaccattcggcagtgtcatgtatgagtttgtggggaaaacggca
cctttcctcattctggctgttctggctgtgctggatggagcactgcaactgttcattctc
cagccctcaaaggtggaaccagagagccagaaagggtcctcactgtggagccttattaaa
gatccatacatactcattgctgcaggatccatttgttttgcaaacatggccatcgccatg
ttagaaccagcgttgcctatttggatgatggagaccatgtgtccaagaaaatggcagcta
ggcgttgccttcgtgccagccagcatctcctaccttattggaaccaacatatttggcgtc
ctcgcgcacaagatggggagatggctgtgctctctaatcgggatggtccttgtgggggtt
agcatcctctgtgttccttttgctaaggacatctatggactgatactcccgaatttcggt
gttggttttgcaattggcatggtggattcctctatgatgccaatcatgggctatttggtg
gacctgagacatgtgtcagtctatggcactgtgtacgccattgctgatgtggctttctgc
atgggcttcgctttaggtccgtccgctggaggcgccatagcgaagagcattgggttcccc
tggctcatgaccatcatcggcatcgtggatatcctctttgctcccctctgctacttcctc
aggagtcctcctgggagggaagagaaaatggccatcttgatggactctaactgctcgatg
aagacccgatcatactcaacacaggggaacacagagtacgaagagatggagacagagtac
gatgagtattaa
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