Coregonus clupeaformis (lake whitefish): 121570152
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Entry
121570152 CDS
T08357
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04517
IgSF CAM signaling
cclu04530
Tight junction
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121570152
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121570152
09144 Cellular community - eukaryotes
04530 Tight junction
121570152
09142 Cell motility
04810 Regulation of actin cytoskeleton
121570152
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121570152
05100 Bacterial invasion of epithelial cells
121570152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121570152
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121570152
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Arp2/3 complex
121570152
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121570152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_HPS5
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
PEP5_VPS11_N
Rax2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
121570152
NCBI-ProteinID:
XP_045074643
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHDVHIYQKDGTKWTKIHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWSLKGEAWKPTLVILRINRAARCVSWSPRENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTVWGSKMPFGEVMFESGPSGAAGEGAGGGWVHGVCFSHSGNRLAWTSHDSTVAIAEGG
KTSTISSLISETLPLLCVSFITENSLVAAGHDCYPVLFVFDGAKGSVTYGGKLDVPKQTS
QRGISARERFQNLDRRGSSSETTEQGLESLHKNSISGGQISALEGGKSKCSKFCTTGMDG
GMVIWDVKSLESSMKDLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccacagcttcctgctcgagccaatcagctgccacgcctggaacaaggaccgg
acccagattgctctgtgtcccaacaaccacgacgtccacatctatcagaaggatgggacc
aagtggaccaagatacatgaactgaaggagcacaatggacaggtcacaggtatagactgg
gctccagaaagtaaccgtatcgtgacctgtgggacggaccgtaacgcgtacgtctggtct
ctgaagggggaggcgtggaaacccaccctggtcatcctccgtatcaaccgggctgctcgc
tgcgtcagctggtctccccgggagaacaagttcgctgtgggcagcggatcacggctcatc
tccatctgctacttcgaacaggagaatgactggtgggtctgtaagcacatcaagaagcca
atccgttccaccatactcagtctggactggcatcccaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcggcctacatcaaggaggtggaggagaagccc
ggccccacagtgtgggggtccaagatgccctttggggaggttatgtttgagtctgggccc
tcaggggcggctggggagggggcaggagggggatgggttcacggggtctgtttctcccac
agcgggaaccgcctggcctggacatcacatgactctactgtggcgatcgcagagggaggc
aagaccagcactatcagcagtctgatctctgagacccttcctctgctgtgtgtcagcttt
atcactgaaaacagcctggtggctgccggtcatgactgctacccagtgctgtttgtgttt
gatggtgcgaagggctctgtaacctacggagggaagctggacgttcccaagcagacgtct
cagagagggatcagcgccagggaacgcttccagaacctggaccgccgaggttcgtcctcc
gagaccaccgagcagggactggagagtctgcacaagaacagcatcagtgggggtcagatc
tctgcactagagggaggaaagagtaaatgttccaagttttgtaccactgggatggacgga
ggaatggtcatatgggacgtcaagagtctggaatcttccatgaaggacctcaagatagtc
tga
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