Coregonus clupeaformis (lake whitefish): 121570153
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Entry
121570153 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04517
IgSF CAM signaling
cclu04530
Tight junction
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121570153
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121570153
09144 Cellular community - eukaryotes
04530 Tight junction
121570153
09142 Cell motility
04810 Regulation of actin cytoskeleton
121570153
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121570153
05100 Bacterial invasion of epithelial cells
121570153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121570153
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121570153
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Arp2/3 complex
121570153
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121570153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_Gbeta
EIF3I
Rax2
Beta-prop_HPS5
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
121570153
NCBI-ProteinID:
XP_045074644
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYQKSGNQWVKGHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSLKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESDNDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSSSGNRLAWVSHDSTVTVVDGTKGSTPS
QLKTEFLPLLSVLFISENSVVAAGHDCCPMLFRCDDGGSLTLVSKLDLPKASITRNISAM
ERFRNMDKRATTEDRNTGLDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcaccagtttctgctcgaacccatcacctgtcacgcctggaaccgggacaga
acccagattgccatcagtcccaacaaccatgaggtccacatctatcagaagagtggtaac
cagtgggtgaagggtcatgagctgaaggaacacaatggacacatcacaggtatcgactgg
gctcctaagtctgaccgtatcgtgacgtgtggggcggaccgcaacgcctacgtctggtct
ctgaaggacggggtctggaagcccactctggttatcctgaggatcaacagggctgctacc
ttcgtcaagtggtctcctctggagaataagtttgctgtgggcagtggagccaggctcata
tcagtctgttacttcgagtctgataacgactggtgggtgagtaagcacatcaagaagcca
atccgttccaccgtcctcagtctggactggcatcccaacaacgtgctgctggcggctgga
tcctgtgacttcaaatgcagggtgttctcggcctacatcaaggaagtagaggagaagccc
ggtccgaccccctgggggtccaagatgccttttggggcggtgctggctgagtttgggggt
gcggggggaggaggatgggtccactctgtgtccttctcctcctctggtaacaggctggcc
tgggtctcacacgactccactgttactgtggtggacggcaccaagggatccactccgtct
cagttgaagactgagttcctccctctgctcagtgttctcttcatctctgagaacagcgtg
gtggcagcgggtcacgactgttgccccatgctgttccgttgtgatgacggagggtcccta
acgcttgtctctaagctggaccttcctaaagcttccatcactagaaacatctcggctatg
gaacgcttcagaaacatggacaagcgggccaccacagaggaccgcaacacaggcctggat
acactgcaccagaactccatcactcaagtctctatctatgagggagacaagagggactgt
cgtaagttctgcaccacgggcatcgatggagccatgaccatctgggacttcaagagtctg
gaggcttccatccaggggctgaggatcatgtga
DBGET
integrated database retrieval system
