Coregonus clupeaformis (lake whitefish): 121570166
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Entry
121570166 CDS
T08357
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cclu01100
Metabolic pathways
Module
cclu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121570166
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121570166
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121570166
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
121570166
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
121570166
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
121570166
NCBI-ProteinID:
XP_041737599
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All DBs
Position
7:complement(73307080..73357935)
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AA seq
928 aa
AA seq
DB search
MVGNLCGRKLARRSKSALIVALTVLLVQTLIVWNFSTLDTREEGANSSREKRDQVGGINK
AYSQYPRSGLPKRHHQPPLGKAAVRHKQQPEGYHSRRPKEKVFLDSNNNENSVPKDFDTV
VDSNSNLGARSQSQRLRPAGNTAKHKPDKALTQGILGKALPNEVNEVNQQYPLPPQQLKP
HRPHPTKPSLSPSIKTSNQHQRHHQPRKSVTAAPVLGQRREQHQCEISGKEAISALSRAK
TRECRQQIAEVYCRHKERTLMPETIPRYCTLEGKANVNVQWDEGLVQTAPAVPVRIAFVL
VVHGRASRQFQRLFKAIYHTSHYYYIHVDQRSNYLHRQVGSLASKYSNVRVTSWRMSTIW
GGASLLTMYLRSMDDLLKMADWNWDFFINLSAADYPIRTNEQLVGFLTKYRDMNFIKSHG
RDNTRFIRKQGLDRLFFECDTHMWRLGDRKIPEGIAVDGGSDWFLLNRMFVDYIINSQDE
LVVSMKRFYAYTLLPAESFFHTVLENSAFCKSMVDNNLRITNWNRKLGCKCQYKHIVDWC
GCSPNNFKPPDLPRFQQTSRPTFFARKFEASVNQEIVTQLDSFLFGPYPQDTPGLQSYWE
NVYDETDSVVSLSDSQLTHYHAFTRMGLSRASMSLQGHADDDSCRYISRGHPVSVHLYFL
SDVFQGYLVRQYASNLATSQIETLETWVTHSNHFTLALTTKTLNRLQFAEVGTDWDAKER
IFRNFGSLLGPMEEPVAMQRWGRGQNVTVTVVWVDPTNVIAATYDILVDGGAEYTHYRPP
LTLPLRPGVWTLRVLHHWNLLASTSFVVSPLEYHDQQPIRQEDTVKFHNGPVHNSYMEQS
FHGLNPILNLPVHLGQVEEAEFNASLTGAELQSWVDRLLAGVWSAADVCSQGPSSCPVMQ
RCRETGWSALSPDLKSDLGPPRGNGRIR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttggcaatctatgcggtcgcaagctggctcgccgctccaaatcagcgctgatagta
gcgctgacagttctcctggttcagacactgatcgtgtggaactttagtaccctggatacc
cgggaagaaggggccaatagtagccgggagaagagggaccaagtcgggggcatcaacaaa
gcctacagccagtacccccggagcgggctgccaaagaggcatcaccaacctccgcttggg
aaagcggctgttcgacacaagcaacaacccgagggctaccactcccggcggcccaaggaa
aaagtcttcctggatagtaacaacaacgagaactcggtccccaaagactttgacaccgtt
gtcgacagcaacagcaacctcggggcgcgttcacagtctcagcgcctgcgaccggcagga
aacacagccaagcacaaaccggacaaggccctaacgcaaggcattctgggaaaggccttg
cccaacgaggtcaacgaggtcaatcagcagtaccctcttcctccacagcagctcaaacca
cacagaccacaccccactaaaccttccctctctccctccatcaaaacatccaatcagcat
cagcgacatcaccaacccaggaagtcggtgactgcagctcctgtgttggggcagcggagg
gagcagcaccagtgtgagatcagtgggaaggaggccatctcggctctgtccagagccaag
accagggagtgtcgtcagcagatagctgaggtgtactgcagacacaaggagaggacactg
atgcctgagaccattcctcgatactgcaccctagaaggtaaggccaatgtgaacgtgcag
tgggatgagggcttggtgcagactgcccctgctgtgcctgttcgcatcgccttcgtcttg
gtggtccatggcagagcctctcggcagttccaacgcctgttcaaggccatctaccatacc
tcacactactattatatacatgtagaccagcgttccaactacctccacagacaggtgggg
tcgctagcgagcaagtactccaacgtgcgtgttacttcctggaggatgtccaccatttgg
ggcggggcgagcctgctcaccatgtacctgcgtagcatggatgaccttctcaagatggcc
gactggaattgggacttcttcatcaacctcagcgcagccgactaccctatcaggaccaat
gagcagctggtgggtttcctgacaaagtaccgggacatgaacttcatcaaatcccacggc
agagacaacacacggttcatccgtaagcagggtctggaccggctcttcttcgagtgtgac
acacacatgtggcgcctaggcgaccgcaagatcccagaaggcattgcggtggacggaggt
tccgattggttccttctgaaccgcatgtttgtggattacatcatcaactctcaggatgag
ctggtcgtcagcatgaagcgcttctacgcatacacactgctgcctgccgagtcgttcttc
cacacagtactagagaacagtgctttctgtaagagtatggtggacaacaacctgcgtatc
accaactggaacaggaagcttggctgtaagtgtcagtacaaacacatcgtcgactggtgc
ggctgctcccccaacaacttcaaacctccagacctgccacgctttcagcaaacgtccagg
cctacgtttttcgcccgtaagtttgaggctagcgtgaaccaggagattgttacccagctg
gacagcttcctatttggcccttatccgcaggacaccccagggctccagtcgtactgggag
aacgtgtatgatgagacggacagcgtagtcagcctatcagacagccagctcactcactac
cacgccttcacacgcatgggcctatcacgggcctccatgtcactgcagggccacgccgac
gacgacagctgcaggtatatctccaggggccacccggtgtctgtccacctgtacttcctg
tcagacgtgttccaaggctacctggttcgtcaatacgctagtaacctagcaaccagccag
atagagaccctagagacttgggtcacccatagcaaccacttcaccctggccctgacaacg
aaaacactcaacagactacagtttgcagaggtgggtacagactgggacgccaaagagaga
atcttcaggaacttcggaagcctcctgggccccatggaggagcctgttgccatgcaacgc
tggggccgggggcagaacgtcacggtaaccgtcgtctgggtggaccccaccaacgtcata
gccgccacgtacgacatcctggtggacggcggggcagaatacacacactaccggcccccg
ttaaccctcccgttacgacctggtgtgtggacgctacgcgttctgcatcactggaaccta
ctagcctccaccagctttgtggtttcacccctggagtaccacgaccagcaacctatacgc
caggaagacacagtgaagttccacaacggcccggtccataactcctacatggagcagagt
ttccacggcctcaaccccatcctcaacctccccgtgcacctaggacaggtggaggaggcg
gagtttaacgcatcactgacgggggcggagctccagagctgggtggaccgtctcctggcg
ggggtgtggtctgcggcagacgtgtgttctcagggtcctagctcgtgtcccgttatgcag
cggtgtcgggagacgggatggagcgcgctcagtcccgacctcaagtctgatctgggcccg
ccccgagggaacggacggattaggtag
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