Coregonus clupeaformis (lake whitefish): 121570204
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Entry
121570204 CDS
T08357
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121570204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121570204
04147 Exosome [BR:
cclu04147
]
121570204
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121570204
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121570204
Exosomal proteins of other body fluids (saliva and urine)
121570204
Exosomal proteins of colorectal cancer cells
121570204
Exosomal proteins of melanoma cells
121570204
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Neuropeptide_S
TBCA_PH
Motif
Other DBs
NCBI-GeneID:
121570204
NCBI-ProteinID:
XP_045067087
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Position
35:15899243..15949946
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AA seq
829 aa
AA seq
DB search
MSFSSSSFRSSSGGSMRGSSMGSSRMSMSGGGGMSMSGGGSRISGSVYGGAGGSGVRISS
ARASKSFSAGGAGFGGGSSFSMSGGGSGSHVIGNEKFCMQNLNDRLATYLAKVHTLEKAN
AELELKIRQFLEAKTSPTARDYGSFHVIISDLQSKMQDAIRMNGAVHLSIDNARLAAEDF
RRKYEIELSMCQSEEADIAGLRRVLEELNMSKKDLSMQIEGLREELVFLKKNHEEELLSM
RAQMSGQVQVEVDAAPQEDLSKVMAEIREHYEAVAAKNNRDLEGWFHAKTEALNKEVAIS
TEVIQTSRSEISEVKRTLQSLEIELQSQMSMKSSMENTLAETKNRFSMQLSGYQMQVTSL
EKQLVNLRADLERQGQEYKMLLDIKTRLEMEIAEYRRLLDGEMTSSVSSSSSSSSTSTRK
VITVIEEVVDGKVVSSKQSSASSYTTPCRSFINLAAAITAHRMECLSFVFEFSNHFRKTY
YIVHLGSCGALAARCATLPLSSPLLQTTPSRSFINLAAAITARRMEHLGSCGALAARCAT
LPLSSPLLQTTPSRSFINLAAAITARWMEYSESRTLDTWAAVGPWQHGVPPFPCPPLLQT
TPSRSFINLAARHHCPLDGTPGQLWGPWQHGVPPFPCPPPSSRPHPPAAINLAAAILPAD
EYSESRTLGLRHHHTHNSSLPLFLVQPLLTRRHLGSCGALAARCATLPPVLPLLQTTPSR
SFINLAATITARWMEHLGSCGALAARCATLPLSSPLLQTTPSRSFINLAAAITARWMEHL
GSCGALAARCATLPLSSPLLQTTPSRSFINLAAAITARRMEYSESRTLG
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagcagcagcttcagatcatcctcaggtggatccatgaggggctcatct
atgggatcctcacgtatgtccatgtctggaggtggtggcatgtccatgtctggtggtggc
agccgcatcagtggcagcgtgtacgggggtgctggtggctctggggtgcgcatctccagt
gccagagcctccaagtccttctctgctggtggtgctggcttcggtggaggctccagcttc
agtatgtctggtggcggaagtggcagccatgtcatcggcaacgagaagttctgcatgcag
aacctgaacgaccgtctggccacctacctggccaaagtccacaccctggagaaggccaac
gctgagctggagctgaagatccgccagttcctcgaggccaaaacctcccccactgctcgc
gactatggctcattccatgtcatcatcagtgacctccaatccaagatgcaggacgccatc
cgtatgaatggtgcagtccatctcagcattgacaatgccaggcttgccgctgaagacttc
agaaggaagtatgagatcgaactgtccatgtgtcagtcagaggaagcagacatcgctggg
ctgaggagagttctggaagagctgaatatgtccaagaaggacctgagcatgcagatcgag
gggctgagagaggagttggtcttcctcaagaaaaaccacgaggaggagctgttgtccatg
cgtgcccaaatgagcggccaggtccaagtggaggtggacgctgcaccacaggaagacctc
agcaaagtcatggctgagattcgcgaacactacgaggctgtcgctgccaagaacaacaga
gatctggagggctggttccacgccaagaccgaggcgcttaacaaggaggtcgcaattagc
acagaagttatccaaacatccagatctgaaatttcagaagtcaaacgcacactgcagagt
cttgaaatcgaacttcaatcacaaatgagcatgaaatcatccatggaaaatacccttgca
gagacaaagaaccgtttctccatgcagctgtcgggttatcagatgcaggtgaccagcttg
gagaaacagttggtaaatctcagggctgacttggaacgccagggccaggaatacaagatg
ctgctggacatcaagaccaggctggagatggaaatcgctgagtacaggagactgctggac
ggagagatgacaagcagtgtctcctcctcctcctcctcctcctccaccagcaccaggaag
gtcatcactgtgatagaagaggtggtggatgggaaagtggtctcctccaagcaatcctca
gcttcttcatataccacaccctgccgcagcttcattaacctggctgccgccatcactgcc
cacaggatggagtgtctcagctttgtctttgagtttagtaaccattttagaaagacctac
tacatagtacacctgggcagctgtggggccctggcagcacggtgtgccacccttcccctg
tcctcccccctcctccagaccacaccctcccgcagcttcattaacctggctgccgccatc
actgcccgcaggatggaacacctgggcagctgtggggccctggcagcacggtgtgccacc
cttcccctgtcctcccccctcctccagaccacaccctcccgcagcttcattaacctggct
gccgccatcactgcccgctggatggagtactctgagagccgcacactagacacctgggca
gctgtggggccctggcagcacggtgtgccacccttcccctgtcctcccctcctccagacc
acaccctcccgcagcttcattaacctggctgcacgccatcactgcccgctggatggaaca
cctgggcagctgtgggggccctggcagcacggtgtgccacccttcccctgtcctcccccc
tcctccagaccacaccctcccgcagctattaacctggctgccgccatcctgcccgcggat
gagtactctgagagccgcacactaggtttgagacatcatcacacacacaactcctctctg
cccctctttcttgtccagcccctgttgaccagacgacacctgggcagctgtggggccctg
gcagcacggtgtgccacccttccccctgtcctccccctcctccagaccacaccctcccgc
agcttcattaacctggctgccaccatcactgcccgctggatggaacacctgggcagctgt
ggggccctggcagcacggtgtgccacccttcccctgtcctcccccctcctccagaccaca
ccctcccgcagcttcattaacctggctgccgccatcactgcccgctggatggaacacctg
ggcagctgtggggccctggcagcacggtgtgccacccttcccctgtcctcccccctcctc
cagaccacaccctcccgcagcttcattaacctggctgccgccatcactgcccgcaggatg
gagtactctgagagccgcacactaggttga
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