Coregonus clupeaformis (lake whitefish): 121570345
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Entry
121570345 CDS
T08357
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121570345
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Other domain-containing proteins
Patched domain-containing proteins
121570345
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
121570345
NCBI-ProteinID:
XP_045076937
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All DBs
Position
7:11055035..11088948
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AA seq
758 aa
AA seq
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MARCKTDCVEKPIARGFEILGGFVGRHPWWFLILPMFISAGLVGGFYFLADREANGIEEM
FTPMNGPAKEERQVVKEYFPQNDGDFSRLRLYTEGTFASLIIMTISYFTSISRDDEFEKS
SDSIIPLFSLTYALAINFSIISCLRLDCIRNKVWVATFGVLSSGMAVLSSFGLLLYCGMP
FAMTVATAPFLILGIGVDDMFIMISCWQQTQVHDNVEDRMAATYKDAAVSITITTLTDAL
AFYIGLLTPFGSVQSFCMYTGTAVLFCYLYNITFFGAFLALNGRREKGNRHWLTCMKVPE
PEENTKKYNLCSIGGAYDHKTGKEEPMPINNFFKMYYGPFLTNTWTKVFVILLYAGYLGS
SIYGCFQIQEGIDLKNLAADSSYVGSYYDNEDQYFSEYGPNVMVVVTDSEFQYWDETARK
RLDTCLRSFESLTLAGQSLVAKDMTLSWLNEYVKAGVVSNPNNETIFMDSLPTFLQQSGF
TQDVNISNKVIIASRLFIQTINVRTAVDEKNMLNKLRETANGCPEKLVVYHPAFIYFDQY
AVIVSNTIQNIVVATLAMLVISLMLIPNPICSLWVTFAIASVIVGVAGFMALWDVNLDSV
SMINLVICIGFSVDFSAHISYAFVSSKEPAANKKAVDAVYHLGYPILQGAVSTILGVVVL
SAAESYIFRTFFKIMFLVILFGAVHGIVFIPVFLTFFGICGGKVSDKKDVDGRSNTLSQR
GHMWVTQTTGDFNMKNVHELRAVAANSNSGQGVRLSVL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggctaggtgcaaaacagattgcgtagagaagcctatagctaggggatttgaaatactt
gggggctttgttggtagacacccctggtggtttttgattcttcccatgttcatctctgcg
ggtcttgtcggaggattttacttccttgcggacagagaagcaaacggcattgaagagatg
tttactcctatgaatggacctgccaaagaggaacgacaagtagtcaaagaatactttcca
cagaatgatggcgacttctctcgtttgcgactctatactgaagggacctttgcatctctc
ataattatgacaatatcttactttacctcaatatcaagggatgacgagtttgagaagagt
tctgactcaatcatacctctcttctcattgacatatgccctggccatcaatttttcaatc
atatcttgtttgaggttggactgtattcgtaacaaggtgtgggtggcaacctttggtgtt
ctctcatctggtatggcagtgctgtccagttttgggttgttgctgtactgtgggatgccc
ttcgctatgactgtggcaacagctccattcctgattctgggaattggtgttgacgacatg
ttcatcatgatttcctgctggcagcagactcaggttcatgacaacgtagaggaccgtatg
gcagctacatacaaagatgcagctgtctcgatcaccatcacaacactaactgatgccctg
gccttctatattggtctgttaactccctttggttccgtacaatccttttgtatgtatact
ggcacagctgtcctgttctgctacttgtacaatattaccttctttggtgcatttctggca
ctgaatggaagacgtgaaaagggcaacagacactggctgacatgcatgaaggttccagaa
ccagaggagaacactaaaaagtacaacctctgtagtatagggggagcttatgatcataaa
acgggaaaagaggaacctatgcccattaacaacttctttaagatgtactatgggccattt
ctaacaaatacttggaccaaggtgtttgtgatcctgctctatgctggatatttgggctca
agtatctatggttgcttccaaatccaagaaggtatagaccttaaaaacctagcagctgat
agctcatatgtaggtagctattacgataatgaggatcaatacttttcagagtatggtcca
aatgttatggttgttgtgactgacagtgagtttcaatattgggacgaaactgctcgaaag
cgtcttgatacttgtctcagaagttttgagagtctaacgttggctggtcaatcattggtt
gctaaagatatgaccctttcttggcttaatgaatatgtaaaagcgggtgtagtttcaaat
ccaaataacgaaaccattttcatggatagtttacctacatttttacaacaatcaggtttc
acacaagatgtgaatatttcaaacaaagtcataattgcctcacgtttgtttattcagaca
atcaacgtcaggacagctgttgatgaaaagaacatgttgaataagcttcgagagacagct
aatggttgtccagaaaagttggttgtttaccaccctgctttcatatactttgaccagtat
gcagtcattgttagtaataccatccaaaacattgtagttgccactcttgctatgctggtg
atctccctcatgttgatccccaaccccatatgttctctgtgggtgacctttgccattgcc
tctgtcatagtgggtgttgctggtttcatggcattatgggatgtcaatctagactctgta
tccatgatcaatcttgtcatctgcattggtttctcagtggatttttctgctcacatttcc
tatgcttttgtctctagcaaagagccggcagctaataaaaaggctgtagatgctgtctat
cacttgggatatcccatcttacagggagctgtgtctactattttaggagtggtggtgctg
tctgctgctgagagctacatcttcagaaccttctttaagatcatgttcttggtcattttg
tttggggcagtccatggtatagtgtttatcccagtgtttctgaccttctttggaatctgc
ggaggcaaagtcagtgataaaaaagatgtagatggtaggtctaacaccttgtctcaaaga
ggtcacatgtgggtcacccaaaccacaggggatttcaacatgaagaatgtgcatgaatta
agggctgtagcagctaattcaaattcaggacagggcgtccgccttagtgttctgtga
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