Coregonus clupeaformis (lake whitefish): 121570392
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Entry
121570392 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121570392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121570392
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
121570392
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
SpoIVA_ATPase
AAA_14
AAA_29
AAA_16
AAA_25
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
121570392
NCBI-ProteinID:
XP_041737816
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All DBs
Position
1:complement(96354814..96361174)
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AA seq
643 aa
AA seq
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MPDVQGTTKWARGEWEKPLARASLLHPRRCTSLVPCVPLGQFPIPHHLLRSSWTTTVNFA
NYSSSTDSEQATETKQTPTWIPTEDVKRILQLAHPERLRLSAAVGFLVVSSAVTMSAPFF
LGQVIDTIYSSSSEDFSASLCSLCFTLLGVFLCGGAARVYLMQISAEWQQIVRNISVTLF
SSILRQEVGFFDKTRTGELINHLSADTALGGFTGSKGNRASLKDELNCLMFPGLSFPLCQ
QFYVSPSLATFVLMIVPPMAGLAVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRA
FGKELTEVAKYTEKANYILHLAKQEAVLLAGFFGVTGLSGNIIIFSVLYKGGLLMATEHI
TVGELSSFHMYAFWVGISIAGMSSFYFELMKGFGAGARLWELLDRKPEFPLNEGIVLRPE
QLKGNLEFQNVSFAYPTHKDAPIFQDLSLSVPAGSVMAVVGPSRSGKSTLVSLLLRLYDP
DSGVITIDGHDVRDLNPYWLRSHIGTVSQEPVLFSCSIDENIAYGAPDSDTVTVQEIQQA
AQIANAYEFVHGFPEGFDTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDA
ENKFLVQEALERLMDGRTVLIIAHRLTTIQNADAVHAAKLSSS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgtccaggggacaacgaaatgggcgagaggtgagtgggaaaagcctttggca
cgcgcttcgcttttacacccgaggagatgcacctctctcgtgccttgtgttccacttgga
cagttccccataccgcaccatttgttgaggagctcatggacaaccacggtcaactttgca
aactacagctcctcaacagactcagaacaagcaacagaaacgaaacaaaccccaacttgg
atacccactgaggatgtcaaaaggatattacaacttgcccaccctgagcgcttgcgactg
tcagcggctgtgggtttcctggtggtttccagtgctgtcaccatgtcggcgcccttcttt
cttggccaggttattgacaccatctactccagctcctcagaggacttcagtgcctccctc
tgctctctgtgtttcacgctcttaggggtgttcctctgtgggggcgctgcccgtgtctac
ctcatgcaaatctcagctgagtggcaacagattgtgagaaatataagtgtaaccctattc
tcctccattctgaggcaggaggtgggtttctttgataagactcgtaccggggagctcatt
aaccacctgtctgcggacacggctttgggtggctttacaggttccaaaggtaacagagca
agcttaaaagacgagctgaattgcctcatgtttcctggcctctccttccctctctgccaa
cagttttacgtgtcacccagtttagcaacctttgtgctgatgatcgtgcctcctatggct
ggcctggctgtcatatacgggagatacctgcgctccatatccaaacgcacacaggactct
ctggccgaggccacacagttggcagaagagcgtatcagcaacatgaggacagttcgggcg
tttggtaaggagctgacagaggtggctaagtatacagagaaggccaactacattctccac
ctggccaaacaggaagccgttttgctggccgggttctttggcgtgacaggactcagtggc
aacatcatcatcttctctgtgctgtataagggagggctattgatggccaccgaacacata
actgtgggagagctctcttccttccacatgtacgccttctgggtgggcattagcattgca
gggatgagctcgttctactttgagctgatgaagggttttggagcaggggcacggctgtgg
gagctattggacaggaagcctgagtttccccttaatgagggtattgtgctgaggccagag
caactgaagggtaatctggagttccagaatgtctcctttgcctacccaacccacaaagat
gcccctatcttccaggaccttagtctctccgtgcctgccggctctgtcatggccgtggta
ggccccagcagatcgggcaaatccaccctggtctccctgctgctcaggctctatgaccca
gactcaggtgtgatcactattgacgggcatgatgtgagagatttgaatccttattggctg
aggagtcacattggaactgttagtcaggagcctgtgctcttctcctgttccattgatgag
aacattgcctatggagctcccgactctgacacggtcacagttcaggaaatccagcaggct
gcacagatcgccaatgcctacgagtttgtccacggtttccccgaaggctttgacactgtg
gtgggagagaagggtgttctactgtcaggtggtcaaaaacagagaattgctattgcaagg
gctctgctgaagaaccccaaaatacttctacttgatgaggctacaagtgccctggatgca
gagaataagttcctggtccaggaggctctggagcggctcatggatgggcgcactgtgctg
atcatcgcccaccgcctcaccaccatccagaacgctgacgccgtccacgccgcaaagctg
tcatcaagctaa
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