Coregonus clupeaformis (lake whitefish): 121570540
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Entry
121570540 CDS
T08357
Name
(RefSeq) orexin
KO
K05246
hypocretin (orexin) neuropeptide
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121570540
04081 Hormone signaling
121570540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121570540
Cytokines and neuropeptides [BR:
cclu04052
]
Neuropeptides
GPCR binding
121570540
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orexin
Motif
Other DBs
NCBI-GeneID:
121570540
NCBI-ProteinID:
XP_041737945
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All DBs
Position
30:complement(52565491..52567145)
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AA seq
151 aa
AA seq
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MCFNTKHRTTVPGMDTGCSSTKKLKVVILMLLVSHLACDAQEVANCCRQKSHSCRLYVLL
CRSGNGTGTRGSLTDDAAAGILTLGKRKETDERRFQSRLNQLLHGSRNQAAGILTMGKRT
EDTAEPLMHLFPILETAPTTTAQSVLQLPFK
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcaacacaaagcaccggactacagtaccagggatggacacaggatgctcatcc
accaagaaactcaaagttgtcatcttgatgctactcgtctctcatctggcctgtgacgct
caggaggttgccaactgttgcagacagaaatcccactcctgccgcctttacgtcctactc
tgtcgctcaggtaatgggacggggacaaggggatccctcactgatgacgcagccgctggc
atcctcacactcggtaaacggaaagaaactgatgaacgtcgtttccagagccggttgaat
cagctactccacgggtcacggaaccaagcggcgggaatcttgacgatggggaagaggacc
gaagacacagcagaaccgctcatgcacttgtttcccattttagagacggcccccaccacc
acagcccagtcggttttacaactaccattcaaatga
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