Coregonus clupeaformis (lake whitefish): 121570541
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Entry
121570541 CDS
T08357
Name
(RefSeq) P43 5S RNA-binding protein isoform X1
KO
K09191
general transcription factor IIIA
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121570541
03021 Transcription machinery [BR:
cclu03021
]
121570541
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121570541
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
121570541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
TFIIIA_zf-C2H2
zf-C2H2_8
zf-C2H2_6
zf-C2H2_jaz
zf-met
Ta0938
Zap1_zf1
Phage_zn_bind_2
Motif
Other DBs
NCBI-GeneID:
121570541
NCBI-ProteinID:
XP_041737946
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All DBs
Position
35:17265273..17269803
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AA seq
391 aa
AA seq
DB search
MNGVPHKQDSGHRQQLFNCNHADYRATFTREWRLKEHETVHTGEQPLQCKVADCGNRFSR
NSHMRRHALGHTGVKKFRCTFVSCTKTFFNADKLKRHVHYAHGEKDTYFKCNFPNCSLTF
KKRRVYKLHLKAHGTSSNFKCSKRGCGVTFDTHVARKAHEKKHAGYRCSQPECNHFEQTW
GKMHKHMAKHQATFTCKLCQKVFKHVDSLRRHKRTHALQKPVLLCPSSGCKAYFSTTFNL
QHHIRKTHLQLLKYHCYFPDCHRTFAMRESLSRHLAHHDPEASPEKQKRKRNKKAWQKRL
EGHHQLPLVEDDLQHLFALRMRVSRRVTVEAGLFNERKIPHFVDSEVNLRDLFSIKPPHS
PHPAEQGPVEVTQPEVTDQGLKVKSKDQLVA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggtaccccacaaacaggactcgggtcatcgacaacagctcttcaactgcaac
catgctgattatagggcaacgttcacacgagagtggcgtttgaaagagcacgagaccgtg
cacacgggagagcaacctcttcaatgtaaagtggctgattgtggcaatcgtttctcacgg
aattctcacatgcgccgccacgcacttggccacaccggggtgaaaaaattcagatgtacc
tttgtgagttgcacaaagactttcttcaacgcggacaagttgaagagacacgtccattat
gcccacggagaaaaggacacgtactttaagtgcaatttcccaaattgctcattgacattc
aagaaacggagggtgtataaattacatttgaaggcgcatggaacatcttctaatttcaaa
tgttcaaagagaggatgtggagtcacgtttgacacccatgtcgctcgcaaagcccatgag
aagaaacatgcagggtaccgctgctcacagcctgaatgcaatcattttgagcaaacttgg
gggaaaatgcacaagcacatggcgaaacaccaggccacattcacctgtaaactgtgccag
aaggtgtttaagcatgtggactctctgcgtagacacaaacggacccatgccctgcagaag
cctgtcctgctgtgccccagcagcggctgcaaggcctacttctccactaccttcaacctg
cagcaccacatccgcaagacccacctgcagctcctcaagtaccattgttacttccccgac
tgccataggacatttgccatgcgggagagcctgagccgacacctggctcaccacgaccca
gaggccagccctgagaagcagaagcgcaagcggaacaagaaggcctggcagaagcgtctg
gaaggccaccaccagctgccactggtggaggacgacctgcagcacctcttcgccttgcgc
atgagggtgtcacgacgggtgacggtggaggctggcctcttcaacgagcgcaagattccc
cactttgtggactcggaggtcaacctgcgtgacctattcagcatcaagccccctcactcc
ccccaccctgcagagcaaggccctgtggaggtcacccagccagaggtcactgatcaaggg
ttaaaggtcaaatcaaaggatcaacttgtagcctga
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