KEGG   Coregonus clupeaformis (lake whitefish): 121570567
Entry
121570567         CDS       T08357                                 
Name
(RefSeq) interferon a3-like isoform X1
  KO
K05414  interferon alpha
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060  Cytokine-cytokine receptor interaction
cclu04217  Necroptosis
cclu04620  Toll-like receptor signaling pathway
cclu04621  NOD-like receptor signaling pathway
cclu04622  RIG-I-like receptor signaling pathway
cclu04623  Cytosolic DNA-sensing pathway
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121570567
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    121570567
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    121570567
   04621 NOD-like receptor signaling pathway
    121570567
   04622 RIG-I-like receptor signaling pathway
    121570567
   04623 Cytosolic DNA-sensing pathway
    121570567
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121570567
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cclu04052]
    121570567
Cytokines and neuropeptides [BR:cclu04052]
 Cytokines
  Interferons
   121570567
SSDB
Motif
Pfam: Interferon Exo84_C DUF4635 Rab5-bind
Other DBs
NCBI-GeneID: 121570567
NCBI-ProteinID: XP_041737974
LinkDB
Position
Unknown
AA seq 175 aa
MYTMQSWTCIFLVICSMQRVCRCCDWIRNHYGLLSAEYLSLLDQMGGDITEQDAPVLSPT
SLYRHIDDAEFEDKVRFLNETIYQIKKQFDGNMKAVTWDKKNLDDFLNILERQFENLNSC
VSPAMKPERRLKRYFKKLNRKVLRKMNYSAQAWELIRKETQRHLQRLEILVGKMY
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtatacaatgcagagttggacgtgtatttttcttgttatttgcagtatgcagcgcgtt
tgtcggtgctgtgactggatccgaaaccactacggactcttgagcgcagaatacctttcc
ctgctggaccagatgggaggagatattacagagcaggatgcccctgtcttgtccccaaca
tcactttacagacacatagatgatgctgagtttgaggacaaagtcagattcctgaacgag
accatctatcaaatcaaaaaacagtttgatgggaatatgaaggctgtcacctgggataag
aaaaacctggatgatttcctcaacattcttgaacgccaatttgagaaccttaattcctgt
gtatcacctgccatgaaacctgagaggagactgaaacggtacttcaagaagttgaatagg
aaggttctgagaaaaatgaactacagtgcacaggcgtgggagctcatcaggaaagagaca
caacgtcatctgcaaagattggagatccttgtgggaaagatgtactga

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