Coregonus clupeaformis (lake whitefish): 121570569
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Entry
121570569 CDS
T08357
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121570569
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121570569
Small GTPases and associated proteins
Rab associated proteins
121570569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_recom
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
121570569
NCBI-ProteinID:
XP_041737978
LinkDB
All DBs
Position
1:complement(53917882..54002438)
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AA seq
1466 aa
AA seq
DB search
MSASVGPRGGPRPPVAPASMHEPDLSHLTEEERKIIMAVLARQKEEEEKEEAMLKEERPI
QARTVNLVGQKKPPQQNDVRGIQQQLSSYRETVRRVGEETRRQTTTGQHRDDAPTCGICH
KTKFADGCGNLCSYCQIKFCARCGGRVSLRSNNEEKVVMWVCNNCRKQQEILTKPGEWFS
GPGKPGLGSGISDPAMCGLNPGDEKLRSRSQVPLGPHDPNCPSVPGLAPGMDLRSRSEPP
RKPGDQNSKGRGEHRPGHPRLHTQVSVDRDQRERERREGRRLSKGRSLEHDPVGAGVPRW
TEEGYHIDTNAPRHLAQPQPGEPLGGRHPLQPQGRGRGVEIGFEGVGGQPEAMLGQRTVV
GGIGGQQDLGPPHLQPPDLRETPGSAPGPGPSPLLRRSKREKAESMLRNDSLSSDQSESL
RPPPPRPYKSKRGGAGKRQTSVSSSEEEGGTTPEYSSCEDAEIESVSERGDWECYPLDPT
VWHHPVTWQPSKEGDHLIGRITLSKRSVMPKEAGALLGLKVVGGRVTEAGRLGAFITVVK
KGSLADIVGHLRAGDEVLQWNSKMLPGATQKEVYNIILNSQAEPQVELVVSRPIVDIPRI
PDTSHPPLESTLTAGSSSFESQKMEQPSISVMSPTSPSTLRDNPQLMPGQLTVLPGQLSV
KLWYDKVGHQLIVNVVQATELPTRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSGEPM
WNQTFVYSHVHRRDFRQHMLELTVWDQPRLPDEDSMFMGEILIELETAPLDDKPHWYNLQ
THDVSSIPLPRPSPYMPRRHTHPNTPSKKLQPAERGSRERERQQRDPHATTLEVPEQQRT
PQHRSRSVSPHREEQGRGRSRPTNVPTQRSLDDEVHHSRRSSSPTRYYDSARGHYQEQDY
VDDSEVILIHQSNRGKSAECLHTKSDLQPSLDRVKTWSASTNCLNPERNHSVPSPEPQSC
SQSLPRRRPGSPRILIQHASPEDDRQTRTLDSSTCHTLGKKLPDRDRIPLQGGASLSSSV
TSSSAARRVRHLPQVPDKSSSPVEQALAAEERVRQLQMKVQQRDSYRSSAAPSTSSRDLE
RALKSKREVSHLSLELYKDQRRTSCENVSRKSSDSDVSDVSAISRTSSASRISSTSYMSI
QSERPRGRFNNAIHASGRSMLKSTSVSGEIYGIERTDGSQSDTALGGGKKRRSSLSQRVV
AIVGLPSRRSCSTSQLTSQKEAVGVDTKKKGKKKNKIQIQRSTEVGMAVDYPRSAMNRQT
SRDSTNGSMNSYSSEGNLIFSGMRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDVQIG
MMDKKGQLEVEVIRARGLNPKPGSKSLPAPYVKVYLLDNGACKAKKKTKIARKTLEPLYQ
QALLFEESPQGKVLQVIVWGDYGRLDHKCFMGVAQILLEELDLSSTVIGWYKLFPPSSLV
DPTLASLTRRASQTSLDSSGPASMRS
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttcggtgggccctcggggcggcccgcgcccacccgttgcgccggcgtccatg
catgagccggacctgagccatctgactgaggaagagaggaagataatcatggccgtgtta
gctcgacagaaggaggaggaggagaaggaagaggccatgttaaaggaggagaggccaatt
caagcaagaactgtgaacctggttgggcagaagaagcctcctcagcaaaatgatgtcaga
ggtatccagcagcagttgtccagctacagggagacggtgcggcgggtgggggaggagacg
cgtcggcagaccaccacgggccagcaccgggacgacgcgcccacctgtggcatctgccac
aagaccaagttcgctgacggctgtggcaacctctgctcctactgccagatcaagttctgt
gcccgctgcggggggagggtgtccctgcgctccaacaatgaggagaaagtggtgatgtgg
gtgtgtaataattgccgtaagcagcaggagatcctcactaagccaggggagtggttctca
ggtccagggaagccaggtctaggctcaggcatcagtgacccggccatgtgtggcctgaac
cccggtgacgagaagctacgttcccgctcccaggtccccctggggccccacgaccccaac
tgccccagtgtcccaggactggcaccaggaatggacctccgctcacgcagcgagccgccg
agaaagccgggtgatcagaacagtaaaggtcgaggtgagcatcggccgggtcatcccaga
ctccacacccaggtgtctgtggaccgtgaccaacgggagcgagagcggagggagggccgg
cggctgagtaagggccgctctctggaacatgaccctgtgggtgcgggggtcccccgatgg
acagaagagggctaccacatagacaccaacgccccccgacatttagcacagccccagcca
ggggagccactggggggcaggcaccctctacagccccaggggcgaggcaggggggttgag
attgggtttgagggtgttgggggccagcccgaggctatgctgggccagaggacagtggtg
gggggtattgggggccaacaggaccttggccctccacatctccagcccccagacctcagg
gaaacccctgggtcagcccctggccccggaccaagccccctcctgcgccggtccaaacgg
gaaaaggctgagagcatgctgcgaaatgattcgctcagctcggaccagtcagagtctctg
cggccacccccgccacggccctacaagtcaaaacgtggcggtgccgggaagagacagaca
tcagtcagcagctcagaggaagagggagggaccacgccagagtacagcagttgtgaggat
gccgagatcgagagtgttagtgagagaggggactgggagtgctacccactggaccccact
gtgtggcatcatccggtgacatggcagccatccaaagagggtgaccatctaatcggccga
atcaccctgagtaagaggagcgttatgcccaaagaggccggggcactgctggggctgaag
gtggttgggggaagggtcacagaggcgggcagactgggagccttcatcactgtagtcaag
aagggcagtctggccgacatcgtgggacacctacgagcaggggatgaggttctgcagtgg
aacagcaagatgttgccaggagcaacccagaaagaagtttacaatatcattctcaattcc
caagcagaaccccaagtggaactagtggtgtcccggcccattgttgatatcccaagaatt
ccagacacgtcccaccctccactagaatctaccctcacagcaggttccagttcattcgag
tcccagaagatggagcagccatctatatcagtcatgtcccccaccagtcccagtacacta
agagacaacccacagctaatgcctggacagctcacagtactgcccggacaactttcagtg
aagctgtggtatgataaggtgggacaccagctaatagtgaacgtggtccaggccacagag
ctgcctacacggccggatgggcgacccagaaacccctacgtcaaaatgtacttcctgccg
gaccgcagtgataagagcaagcggaggactaagacagtgaagaagagcggagagcccatg
tggaaccagacgtttgtgtactcccacgtccaccgcagagacttccgccaacacatgcta
gagctgactgtgtgggaccagcctcgcctacctgatgaggatagcatgttcatgggcgag
atcctgatagagctcgagacagccccgttggatgataagcctcattggtacaatctgcag
acccacgacgtgtcatccatccctctgccccggccatccccctacatgccccgcagacac
acccaccccaacacacccagcaagaagcttcagccggccgaaagaggctcacgggagaga
gagaggcagcagagggatccccacgccaccactctggaggtgccggagcagcagaggaca
ccccagcatcgctctcgatctgtctcccctcacagagaggaacagggcaggggccgatca
cgacccaccaacgtccccacccagaggagtttggatgatgaggtccaccatagtaggagg
tctagttctcccacccgctactacgactctgccagaggacactaccaggagcaggactat
gtagatgacagtgaggtcatcttgatccaccaatcaaatcggggcaaaagtgcagagtgc
ctacacactaaaagtgatctacagccttctctggacagggttaagacttggagcgctagc
accaactgtctgaacccagaaaggaaccacagtgttccttcaccagagccccaaagctgt
tcccagtctctgccccgcagacgccccggcagccccaggattctaatccaacacgcctcc
ccagaagacgacaggcaaactcggaccctggactcatccacctgtcacactctgggcaag
aagctccctgacagagacaggatccccctccaaggtggtgcgtctctgtcctcctccgtg
acgtcctcgtcagcagctcgcagggtcagacacctcccacaggtccccgacaagagtagc
agccccgtagagcaagctctagcagcagaggagcgtgttcgtcagctccagatgaaggtg
cagcagagggactcctacaggagttctgctgctccctccacttccagcagggacctggag
agggcgcttaagagcaaacgcgaggtcagtcacctttcactagagctgtataaggaccag
aggagaaccagctgtgagaacgtatcccgcaagtcttcagacagtgatgtcagtgacgtg
tcagccatctctcgcaccagcagtgcctcccgcatcagtagtaccagctacatgtccatc
cagtcagagagaccccggggacgcttcaacaatgcgatccatgcgtcaggccgcagcatg
ttgaagagcaccagcgtgagcggtgagatctatggcattgagcgcacggacggcagccaa
tcagatacagcattgggcgggggcaagaagcgacgctccagcctcagccaacgcgtggtg
gccatcgtgggcctgccctccagacgcagctgcagcacctcacagctcacctcccagaaa
gaagcagtgggggtggatactaagaagaagggcaagaaaaagaacaaaatccagatccag
aggagtacagaggtgggtatggctgtagattacccccgctctgccatgaaccgccagacc
agcagagactccaccaacggcagcatgaacagctacagctctgaggggaatctaatcttc
tcggggatgaggctgggggctgacagtcagttcagtgacttcctggatggccttggcccg
gcccaactggtgggccggcaaacattagccacacctgccatgggagatgttcaaatcgga
atgatggataaaaaaggccagctggaggtagaggtgatcagggcacgtggccttaacccc
aaaccagggtccaaatcactcccagctccctatgtcaaggtgtacctgttggacaacgga
gcctgtaaagccaaaaagaaaaccaagattgcacgtaaaaccctggagccactttatcag
caggccctgctgtttgaggagagcccacaggggaaggtcctccaggtaatagtctggggc
gactacgggcgactggaccacaaatgcttcatgggagttgcacagatcctattggaggag
ctggatctctctagcacagtgattggctggtacaaactgtttcccccgtcctcattggtg
gaccctacattagcctcgctcacgcggcgggcgtcccagacatccctggacagctcagga
ccagctagtatgcgctcttag
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