Coregonus clupeaformis (lake whitefish): 121570740
Help
Entry
121570740 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: delphilin-like
KO
K26413
delphilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121570740
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
121570740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PDZ
PDZ_6
PDZ_2
USH1C_N
PDZ_Tricorn
Imm30
Motif
Other DBs
NCBI-GeneID:
121570740
NCBI-ProteinID:
XP_045076942
LinkDB
All DBs
Position
7:complement(3692510..3784961)
Genome browser
AA seq
1919 aa
AA seq
DB search
MRRFLSRKGRFSLRQSKSGPRGASKDFCLSNQPNPDYSPDLTLPATNQNWPEEFGFTLGG
AGPSYILSVIEGSSAYLAGLQPGDQVVDIEGQEVSSLSTQALVALAQTLKTVPPSIGVVS
RIEQMDINPGPDGRFGFTIVGDCPLLVDDCLPNSPAGRSGLRAGDYVMEVNGIPVKHHET
AAAMIKVAQGRPLRLGVLSMRRRIKRLSHSMREVSLSGDSVRQDRAHKALEFNKKVEEVL
GDEPDIKEQLFGVLKQYAAERNVENLAEALPDILTNEDHQQLIDSVRIFIPKKHRERFDD
VVSQSLIGRLKGRSFSDPSRNRLRRSRSEDHPERLLVSTRASSVPRTHAEEGDAPIRGLR
KTTSLIAGHAGNAAALRRTVRVCKGNLSFGFTLRGHAPVWIDSVIPGSPADKAGLKPGDR
ILFLNGLDMRSCSHEKVVSMLQGSGAMPTLVVEEGPPTFTLAEPEQPGGPGRASPGGGVP
RSPVLNSLQWVAEILPSSIRVQGRTFGQQLEHLLTIQERYTICKALENFFQHRNVDTLIV
DVFPVLDTPAKQVIWRFVYQLLTYEEQEHCQSKISRFLGYKTAAPAPPPEPEPAPEPHRR
SSSMKVTGTAYRASMRGRSSDDLVIGTHLGMGIRTDPGEMGMRLAPGERQSGDGTSLPET
PNNLTNLSAVYAELENVYSGKRSKSLKARAPPPADSLVELEVLEHAGSPSMHANTGSRKG
PPPPPSAWQEPLPSPPAPVQFYPPGLTSQTSAESNPYISLDSPPPSPPDYPASPPSHARL
NKRRYTFSHPPRSSDTDRFLDALSEQLGQRVAIVDDFLSPENDYEEDVVQMSFPDEEDED
DEEVGVDDEDGDGGFIIPPELSSPSEYQGSSGEDASSLTYSSSSEHIPPPPMTPPPPPPI
QFNDPPLPPSYTATPEQSPRIQLPFRRHPGPPPPPPPRSNPPPKRQSIHKVLPTREDLLA
HAAIQEQKAYQEKQALQEQQAYQDQQAFQEQQAYQDQQAYQERQVYQEQQAIQEQRAFQK
QQAFQEQKAYQEQQAHQAQQKRQAYQEQQAFQEQQAYQEQQAYQEQQAHQEQQAYQEQQA
YQEQQVYQEQQAYQEQNIYQGHQSLPAQSSHKAHPLQQLHQSLPPLPSPEAAHTHPDHPN
HPDPSLYQMHQAQQQTRRQSRRQTHSATSPHNPPRSPVHPDQQSQYSEAIYQSLHTQSHH
SSMELLHQAHQIQQHHSSMELLHQAHQVQQHHSSMELLHQAQEVQQHHSSMELLQQAHRV
QQHHSSMELLHQPHHSSTELLHQAHQIQQHHSSTELLHQAHQIHQDQPASLTVHLDQESH
QSLQTHQSHQTHPSSQASHQGQQTHQTRQSLKSHRTHQPSPQRPHSIQQTYHHTPQIQHI
HHQVPSQPTQPELHQIHLIHQPTQQRHHPQPTLSTFQPLPPHQPTLSTFQPLPQHQHQPH
QTHKVHPSNQGRPQSQPSQRLLSQSQSHHHSHLQPQAQPQPKQHSQSQNNLDQLGKQEPP
PPPPLPPPGTPPPLPRPGLPRMDSNHMSVKRLRWEQVENSEGTIWGQLGEDSDYDKLNDM
VKYLDLELHFGTQKNPISLPDPAPQSETFKKKDIVEILSHKKAYNASILIAHLKLSPGEL
RQVLMTMATERLEPAHIKQLLLYAPDAEEVKQYEQYSEDPAKLSEPDQFVLQMLSVPEYK
TRLRSLHFKSTLQEKTEEMRGGYDCIYNASMELKTSKKLAKILEFVLAMGNYLNNGQPKT
GNKTTGFKINFLTELSTTKTVDGKSTFLHILVKSLCLHFPNVLDFAKDLTTVPLAAKVNQ
RTITSDLNDLHTTIQDIRSACQKMPATADDRFAAVMSGFLENIHPALQSLESLQQRAMEE
WSKTASFFGEDSQATNTEAFFGIFAEFLAKFERALSENQANENPPRSPRSPRMASPLAW
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctttctgagccgcaagggccgcttctcactgcgccagagcaagtctggacct
cgcggtgcctccaaagatttctgcttaagtaaccaacccaatcctgactactctccagac
ctgaccctcccggcgaccaatcagaactggccggaggagtttgggttcactctggggggc
gcgggccccagctacatcctgtctgtgattgagggcagcagtgcctacctggcgggcctg
cagcctggggaccaggtggtggacatcgagggccaggaggtgtcctctctcagcacccag
gccttggtggccctggcacagactctgaagactgtaccccccagcatcggagtggtgtca
cgcatagaacagatggacatcaacccaggccccgacggccgtttcggcttcactatcgtg
ggagactgccccctcctggtggatgactgcctgcccaactccccggcgggccgcagtggc
ctccgggccggcgactacgtcatggaggtcaacgggatccccgtcaagcatcacgaaacg
gcagcggccatgatcaaggtggcgcaggggcgcccactgcgtctgggcgtgctcagtatg
agacggaggatcaagcgcctcagccacagtatgagggaggtgtcactgagcggcgatagc
gtcaggcaggaccgtgcacacaaggccctggagtttaacaagaaggtggaggaggtgctt
ggtgatgagccagatataaaggaacagctgtttggtgttctgaagcagtacgcagccgag
aggaatgtggagaacctagctgaagccctcccggacatcttaaccaatgaagaccatcag
cagctgattgacagcgtcagaatcttcattcctaagaagcaccgggagcgcttcgatgac
gtcgtgtcccagagcctgatcggccggctcaaggggaggagcttcagcgaccccagccgc
aaccgcctgcgccgaagccgcagcgaggaccacccggagcgcctgctggtgtccacccgg
gccagctccgtcccccgaacgcatgccgaggagggcgatgcccccatccgtggcctcagg
aagaccacctcactcatcgcggggcacgctggaaacgctgcagcccttcgcaggacggtg
agagtctgcaaagggaacctgagttttggattcaccctcaggggccatgcacctgtatgg
atcgactcagtcatcccagggagtccagcagataaggcggggctcaaacctggagaccgt
atcctgttcctcaatggacttgacatgaggagttgttcccatgagaaggtcgtctccatg
ctgcagggcagcggtgccatgcccaccctggtcgtggaggaaggcccccccaccttcacg
ctggccgagcccgagcagccaggagggccagggagggcgtccccgggtggaggcgtcccc
cgctccccagtgctcaactccctgcagtgggtggctgagatcctgccttcctctatcagg
gtccaggggcgcaccttcggacagcagctggagcacctgctcactatccaggagagatac
accatctgcaaagccctggagaacttcttccagcataggaatgttgacactctgatcgtg
gacgttttcccggtgttggacacgccagccaagcaggtgatctggcgttttgtctaccag
cttctgacctacgaagagcaggagcactgccagagcaagatatcacgtttcctcggttac
aagactgcagcgccagcccccccacctgagccagagcccgcccccgagccccatcgccgt
agcagctccatgaaagtgacaggaaccgcctacagggccagcatgcgtgggcggagctct
gacgacctcgtcatcggcactcacctggggatggggatccgtactgatccaggggagatg
gggatgaggctggctccaggggagagacagtcaggagacgggacgtccctcccagagacc
cccaacaacctcaccaacctgtctgcagtgtatgctgagctggagaacgtgtactcaggg
aagaggtccaagtctctgaaggctcgcgctcctcctcctgcagacagtctggtagagctg
gaagtcctcgaacacgcaggctctccgtccatgcacgctaacacaggtagccgtaagggc
cccccaccacctccctccgcctggcaggagcccctccctagcccccctgccccggtccag
ttctaccccccaggtctcacctcccagaccagtgccgagtccaacccctacatcagcctg
gacagcccccctccctcgccccccgactaccccgccagcccaccctcccacgcccgtctc
aataagaggcgctacacgttctctcatccgccgcgctcctccgatacagaccgtttcctg
gacgcgctgagcgagcagctgggtcagagggttgccatcgtcgacgacttcctgtcaccc
gagaacgactacgaggaggatgttgtccagatgagcttcccagatgaggaggatgaggat
gacgaggaggtgggggtggatgatgaagatggagacgggggtttcataataccccctgag
ctgagcagccccagcgagtaccagggcagcagcggagaggacgcctcctccctcacctac
tcctcctcctcagaacacatccctcctccccccatgactcccccgccacctccacccatc
caattcaatgatcctcctctacccccaagctacaccgccacccctgaacagtctcccaga
atacaactacctttccgccgccaccctgggccgcctccaccccctcctcctcgctccaac
ccgccgcccaaacgccagtccattcacaaggtgcttcctacccgggaggaccttctagcc
cacgctgcaatacaggaacaaaaagcgtaccaggagaaacaagcattacaggagcaacaa
gcttaccaggaccaacaagcgtttcaggaacaacaagcttaccaggaccaacaagcgtac
caagagcgacaagtgtaccaggaacaacaagcaatccaggagcaacgagcattccagaag
caacaagcatttcaggaacaaaaagcttaccaggagcaacaagcacatcaagcgcaacag
aagcgacaagcttaccaggaacaacaagcattccaggagcaacaagcttaccaggagcaa
caagcttaccaggagcaacaagcacatcaagaacaacaagcataccaggagcaacaagcg
taccaggagcaacaagtgtaccaggagcaacaagcgtaccaggagcaaaatatttaccag
gggcaccagtcactgcctgcccagtcctcgcacaaagcacaccccctgcagcagcttcac
cagtccctgccccccctcccctctccagaggcagcccacacccatccagaccatccaaac
cacccagacccctcactctaccagatgcaccaagctcaacaacagactcgtcgtcagagc
cgtcgtcagactcactcagccacatcacctcacaaccccccacgttcccctgtccatcca
gatcaacagagtcagtactcggaggcaatctatcagagtcttcatacacagtcacatcac
tcatctatggagctccttcaccaagctcatcagatccagcagcaccactcctccatggag
ctccttcatcaagctcatcaggtccagcagcaccactcctccatggagctccttcatcaa
gctcaggaagtccagcagcaccactcctccatggagctccttcaacaagctcatcgggtc
cagcagcaccattcatccatggagcttcttcaccaacctcaccactcatctacagagctc
cttcaccaagctcatcagatccagcagcaccactcatccacggagctccttcaccaagct
catcagatccaccaagatcagcctgcttcactaacagtacacctggatcaggagagccac
cagtctcttcagactcatcagagccatcagactcacccatcttcccaggccagccaccag
ggtcagcagactcatcaaactcgtcaatctctcaagtctcatcgcactcaccagccatct
ccccagcgtccccactccatccagcagacttaccaccacactccccagatccagcacatc
caccaccaggtcccttcccagcccactcagccagagctccaccagatccacctcatccat
cagcccacccagcagcgccaccacccccagcccaccctgtccaccttccagccccttcca
ccccaccagcccaccctctccaccttccagcctctgccccaacaccaacaccaaccccac
caaacccacaaggtccacccctccaaccagggtcgtcctcagtcccagccctctcagcgg
ctactcagtcaatcccagtctcaccaccactcccacctccaaccccaggcccaacctcag
cccaagcagcattcccagtcccagaataacttggaccagttggggaaacaggagcctcct
cctcctccgcccctgccccctcctggaaccccgcctccgctgcctcgccccggccttcca
aggatggactccaaccatatgagtgtaaagaggctgcgctgggaacaggtggagaactct
gagggcaccatctggggacagttgggagaggattctgattatgacaaactgaatgacatg
gtgaagtatctggatctagaactgcactttgggacacaaaagaaccccatttctcttcca
gacccagcccctcagtcggagaccttcaagaagaaagacatagtggagattctgtcccat
aagaaggcctacaacgcatccatcttgatcgcccacctgaagctgtccccaggtgaactg
cgccaggtgctgatgaccatggccacagagcggctggagccggcccacatcaagcagctg
ctgctatacgcccctgacgcggaggaggtcaagcagtatgaacagtacagcgaggacccg
gccaagctcagcgagcctgaccagtttgtactacagatgctgtcagtaccagagtacaag
actcgtctgagaagcctccacttcaaaagcaccctgcaggagaagacagaggagatgagg
gggggctatgactgcatctacaacgcctccatggagctcaagaccagcaagaaactggcc
aagatactggagtttgtgctggcgatgggaaactatctgaacaatggtcagcctaagacc
ggcaacaagaccaccgggtttaagatcaacttcctcactgagctcagcaccacaaaaaca
gtggatgggaaatctacgtttctgcacatcctcgtcaagtcactgtgtcttcactttccc
aacgtcctggattttgccaaggacctcaccacggttcccctggcagccaaagtgaaccag
aggaccatcacatctgatctgaatgaccttcacaccactatccaggacatccgatctgcc
tgccagaaaatgcctgctacagcagatgaccgcttcgctgcagtcatgagtggcttcctg
gagaacatccacccagcgctacagtctctggagtccctgcagcagagggccatggaggag
tggtccaagacagcctccttcttcggagaggacagccaggccaccaacacagaggccttc
tttgggatatttgccgagttcctcgccaagtttgagagagctctcagtgagaaccaggcc
aatgagaaccctcctaggagtcccaggagcccaagaatggcctcacccctggcctggtga
DBGET
integrated database retrieval system
