Coregonus clupeaformis (lake whitefish): 121571001
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Entry
121571001 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121571001
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571001
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121571001
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121571001
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121571001
UBL E3 ligases
121571001
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121571001
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121571001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
DUF7385
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
121571001
NCBI-ProteinID:
XP_045078135
LinkDB
All DBs
Position
8:complement(3948845..3966716)
Genome browser
AA seq
593 aa
AA seq
DB search
MAPTKMKLRVRRKESGGAGGQEQEETSKTSSQSVSAEASPDSKCPICLDRFNNMSYLDRC
LHRFCFRCIQEWSNNKVECPLCKQPFSSILHSIKAQDNFKEFTLRPAPVPGENGTAMIAA
AEAAAAALVTARVGDNQGERRRTRRRGGGGGGRERRQSGRLWRGRGLSSAPSPPLPTLHP
PPLPRPDEGGMRGEMDGEDPGVIFEGLTGVAAPPPHDRGVQRLMVRLAARRRSQREGRSA
RLLRPREMLSFRRALYRSGVRVRNGRGSGERPRDITAAFYQRNPAGLHRLLPWLQRELTV
LYGAHGSLVNIVQRIITSRITRHDMEGGGGAIQDELRPFLLARTDHFLHELISFARSPLS
LEAYDQLAIYDPPAPSYEDRMTSSSDTDDSVIAISDEEEEEGGSMGGRERRPVSVAGSSA
LSQSAWDDETPGPSYSTAEPSHSPMPLSISPGGRDSGPVGANQHPAQDMTAAGDEEEEEG
EQCMIVGFVKAMAERTPELVQLSSDPSDEEEKETLPLPALPPLSLAISPLFKNTSTERQG
GVGESGVGEGGVGEGGVGEGTGERGLGESGLGESGLGESGLGESGLGEGEGEF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcccctactaagatgaaactgcgtgtccggcggaaggagagcggaggtgcaggaggt
caggaacaggaagagacctctaagacctcctctcagtcggtttcggccgaggcgtctcct
gactctaaatgcccaatctgtctggaccgcttcaacaacatgtcttacctggacaggtgc
ctccaccgcttctgcttccgatgcatacaggagtggagcaacaacaaggtggagtgtccg
ctgtgtaagcagccgttctcctccatcctccactctatcaaggcccaggacaactttaaa
gagtttactctcagaccggcacctgtacctggagagaacgggaccgcaatgatcgcagct
gccgaagcagccgccgctgccttggtgaccgccagggtgggcgataatcagggagaacga
aggaggacgcggagaagaggaggaggaggaggagggagagagaggagacagtcaggacga
ctgtggagagggaggggactctcttctgctccttcccctcctctccccactcttcatccc
cctcctctaccccggcccgatgaaggagggatgagaggagagatggatggagaggacccg
ggggtgatctttgaagggctgactggtgtggccgcacccccccctcacgaccgaggggta
cagcgcctcatggtgcggctggctgctaggcgacggtcccagagagaggggcgctccgca
agactgctccgaccacgggagatgctctcctttcgccgggctctctaccgcagtggcgta
cgtgtcaggaacggtcgcggcagtggcgagaggccccgtgacatcacggcggcattttac
cagcggaacccggcaggtctccatagactcctcccctggttacagcgggagctgacggtg
ctgtacggcgcccacggctcattggtcaacatcgtccaacgcatcatcacatcgcgaatc
acacgtcacgacatggagggagggggcggggccatccaggacgagctccgtcccttcctg
ctggcgaggactgatcacttcctccacgagctgatcagttttgcccgttcccctctcagt
ttggaagcgtatgaccagctggccatctacgaccctccagcgccgtcctacgaggacagg
atgacatcatctagcgacactgacgactccgtcatcgccatctcggatgaagaggaagag
gaaggagggtcgatgggaggacgggagagacggccggtgtcggtagcaggaagtagcgct
ctgagccaatccgcttgggacgatgaaacaccaggaccctcctactctacagctgagccg
tcccattcccccatgccgctgtcgatcagccctggggggcgggactctggtccagtggga
gccaatcagcatcctgctcaggacatgacagcggcaggagatgaggaggaggaggaggga
gaacagtgtatgatcgtggggtttgttaaagccatggctgagagaactcctgaactggtc
caactctcctctgacccctcagacgaagaggagaaagagactcttccacttccagcacta
ccccctctctctctcgctatctctcctctgtttaaaaacaccagcacagagagacaggga
ggagtgggggagagcggagtgggggagggcggagtgggggagggcggagtgggggaaggg
actggggagaggggactgggggagagcggactgggggagagcggactgggggagagcgga
ctgggggagagcggactgggggagggagagggagagttctga
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