KEGG   Coregonus clupeaformis (lake whitefish): 121571031
Entry
121571031         CDS       T08357                                 
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121571031
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121571031
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 121571031
NCBI-ProteinID: XP_041738196
LinkDB
Position
35:40798108..40815769
AA seq 1395 aa
MSYDNSNSAPGNDTRGRVGSTNEEEEEAGTGVSSPGSNNNSGSQSGSGGSSGRDQRGPSS
DDGDTLSSGNDSGERDPSEGGSGSRGHQSRSSHCSSSQKDSGMMLENTESNKSSNSQSQS
LSPPSSSLAYSLLSASSEQDPPSTSGCSSNEQHQTARVQTQKEMLKALKELKVRLPAECK
GKGRSSTLDALKYALNCVKQVRANQEYYHQWSVEECHSCSLDLSSYTVEELDNITSEYTL
KNTDTFSMAVSFLTGKVVYISPQGSSLLRCKPERLHGAIFSELLAPQDVSTFYSSTAPCR
LPPWATCMGSVSPPTDCTQEKLMYCRISADRAQGGEMKYHPFRMTPYQLTLRDFDTSDPQ
PCCLLIAERVHSGYEAPRIPADKRIFSTSHTPSCLFQEVDERAVPLLGYLPQDLVGTPVL
LYLHPEDRPIMVAIHRKILQSAGQPFDSSPLRMCARSGEYVTIDTSWSSFINPWSRKVAF
IVGRHKVRTSPLNEDVFTPLRGCEGRPVAPEVVQLSEQIHRLLVQPVHSCGSQGYSSLGS
NGSHSHEQRYRSAASDSKSTNAMEAMEAAVVALHKPMTFQQICKNVHMVKTSGQQVFIDS
RNRAPPRRHAVTTLRAIGEVDPIKSLIPEVVCPPKTPVPNTQQLVKEPPGDYSYQQINSL
DSIIRYLDGCNVPNTVKRKFGSSSGPSTSDEDIQQQATAGNAKGGPATTVTLVGDSAGVP
PLALRSHKAESVASVNSQCSFSSTIVHVGDKKPPESDVVMEGAPPTPMPATSTTKSPPTA
IIAPPPPKTTSPPSRRGVGLTKEVLSAHTQQEEQAFLCRFSDLSQLRVFEPASGLRCPLP
TGNTRARGVHCSPDYPAAGGSSGRRGAKRLKQQESSEQRGPLALGLTGPLRGPNVGPRNS
TYTLPMMPLGPPTTTSSSWPASVGSQASLPSVPYLPGTLPLYPIYPPLSQPMQNQMVPPM
MTLVLPNYMFPQLNPNMPQMATAMNTMGCPMPQPGASMVTPGPQQFFNPSAGFPFPGTNA
TPCPMPTMPSMLSLVQTAVPIQAQRPASRPSTPQSCSQVPADREGAESPLFHSRCSSPLN
LLQLVEESPSNRLEVATALAAAAQQATPPAQGTRGRSADNSKENANSNQDAESTSSGLLD
LLLQEDSRSGTGSSGSGLGSSGSGSGSLGTGSNGCSSSGSGTSRSRSSHTSKYFGSIDSS
ENEHSRRQPAGGSRTGGDGEEQFIRCVLQDPIWLLMANTDRKVMMTYQLPTKDRETVLRQ
DREALRAMHKHQPRFSEDQKRELSQVHPWICTGRLPRAINTSACVGCKSPPAIAAAAPFD
MEIRDMEQCTATQEKAPLPETAMDQGGEAHREEREGHAAHSETQGNVQEMTTEEQEVTSP
TEEEKARAGETDMTH
NT seq 4188 nt   +upstreamnt  +downstreamnt
atgagttatgacaactcaaactccgcccctggcaatgacactcgggggcgagtgggaagc
accaatgaagaagaggaggaggcgggaacaggagtgagctcccccgggagcaacaacaac
agtggcagccaatccggctccggtggctcgtccggaagggaccagaggggtcccagctca
gatgacggggacactttatccagcgggaacgactccggggagagggacccgagtgaagga
gggagcgggtccaggggacatcagtccaggagttcccactgctcctcgagccagaaggac
tcgggcatgatgctggagaacacagagagcaacaagagctctaactcccagtcccagagc
ctgtctccccctagcagttccctggcctacagcctgctgtcagccagctcagagcaggac
cctccttccacctccggctgcagcagcaatgagcagcaccagacggcccgtgtccagacc
cagaaggagatgctgaaagccctgaaggagctcaaggtccgcctgccggccgagtgcaag
ggcaaaggtcgctccagcaccctggatgccctcaagtacgccctgaactgtgtgaagcag
gtacgggccaaccaggagtactaccaccagtggagtgtggaggagtgccacagctgcagc
ctggatctgtcctcatacaccgttgaggagctggacaacatcacctccgagtacacccta
aaaaacacagacaccttctccatggcggtgtccttcctgacaggcaaggtggtgtacatc
tccccccagggctcgtccctgctgcgctgcaagccagagaggctccatggggccatcttc
tctgagctgctggctccccaagacgtcagcaccttctacagcagcacggccccctgccgc
ctgcccccctgggccacctgcatgggctctgtctccccaccgacagactgcacccaggag
aagttaatgtactgtcgcatcagcgccgaccgggcacagggaggtgagatgaaataccac
cccttccgcatgaccccctaccagctaaccctgagggactttgacacgtcagacccccag
ccctgctgtctgctcatcgctgagcgggtacactccggatacgaagctcccaggatccct
gcggacaagaggattttttccaccagtcatactcccagctgtctcttccaggaagtagat
gaaagggctgtgccgttgctgggatacctcccccaggacctggtgggaacccctgtgctt
ctctacctccacccagaggacagacccatcatggtggccatacacaggaagatcctccag
tctgcgggccagcccttcgacagctctccgctgaggatgtgtgcccgcagcggggagtac
gtgaccatcgacaccagctggtcctccttcatcaacccctggagcaggaaggtggccttc
atcgtggggcgccacaaagttcgaaccagccccctgaacgaggacgtgttcacccctctg
cgggggtgcgagggccggcccgtggccccggaggtcgtgcagctgagcgagcagatccac
cgtctcctggtgcagccggtgcacagctgtgggtcgcagggttacagcagcctgggctca
aatggatcacactcccatgagcagcggtaccgcagcgccgcgtccgacagcaagtccacc
aacgccatggaggccatggaagcagccgtggtcgccctgcacaaaccgatgacgttccag
cagatctgcaagaacgtgcacatggtcaagaccagcgggcagcaggtcttcatcgactct
cgcaaccgagccccgccccggcgacacgccgtaaccacgctacgagccattggagaagtg
gaccccatcaagagtctgatcccggaggtggtgtgcccacccaaaaccccggtgcccaac
acccagcagctggtgaaggagccccccggtgactacagctaccaacagatcaacagtctg
gacagcatcataaggtacttggacggctgtaacgttcccaacacggttaagaggaagttt
ggctcgtcctctggcccgtccacatcggacgaagacatacagcagcaggcaaccgctggc
aacgcaaaaggtggtccagcgactacagtcaccttggttggggactcagcgggggtaccc
ccactggccttgcgcagccacaaggcggagagcgtagcctcagtcaactctcagtgcagc
ttcagcagtaccatcgtccacgtgggagacaagaagccccccgagtcagacgttgtcatg
gaaggtgctcctcccactcctatgccagccacttccacgaccaagtctcctcccaccgcc
atcatcgcccctcccccgcccaaaacgacctctccacccagccggagaggagttggcctg
accaaggaggtgctctctgcccacacgcagcaggaggagcaggccttcctctgtcgcttc
agtgacctgagccagctgagggtgttcgagccagcctcgggcctgcgctgcccgctcccc
accggcaacacccgcgccagaggagtgcattgttctcctgactaccctgcagctggagga
agcagtggccgccgtggagccaagaggctgaagcagcaggagtcctcagaacagaggggc
cctctggctctgggcctgaccggacccctcaggggccccaacgtcggccccaggaactcc
acctacaccctcccaatgatgcccctggggcctcccaccaccacctcctcctcctggccc
gcctccgtgggatctcaggccagcctgccttccgtgccctacctcccgggcacgctcccc
ctctaccccatctaccctcctctctcccagcccatgcagaaccagatggtacctcctatg
atgaccctggtgctgcccaactacatgttcccacagctcaaccccaacatgccccagatg
gccacagccatgaacacgatgggatgccccatgccccagccgggagccagcatggttacc
cccggcccacagcaattcttcaaccccagcgcgggtttccccttccccggtaccaacgcc
acgccatgccccatgcctacgatgccctcaatgctctcactcgtgcaaaccgccgtgccc
atccaggcccaacggccagcctctcgccccagcaccccccagtcatgtagtcaagtaccg
gccgaccgtgagggtgcagagtcacccctcttccactctcgctgctcctccccgctcaac
ctgctgcagctggtagaggagtcgcccagcaaccggttggaggtcgccacggcgctggct
gctgccgcgcaacaggccacgcctcccgcacaagggactcgggggagatcggcagataac
tccaaggagaacgccaattccaaccaggatgctgagtccacctccagtggcctactggac
ctgctcctgcaggaggactcccgctcaggcaccgggtcctctggctctgggttagggtct
tctggatccggatctgggtccttgggcactgggtccaacggctgcagctcctcaggcagt
ggaactagtcgcagtcggagtagccacaccagcaagtacttcggcagcatcgactcgtca
gagaacgagcactcccgcaggcagccagcaggtggcagcagaacagggggagacggagaa
gagcagttcatcaggtgtgtcctgcaggaccccatctggctcctcatggccaacactgac
cgcaaggtgatgatgacctaccagctgcccaccaaggacagggagacggttctgcggcag
gaccgcgaggccctgagggccatgcacaaacaccagccccgcttcagtgaggaccagaag
agggaactgagccaggtccacccctggatatgcaccggtcgccttccccgcgccatcaac
acctcggcatgtgtggggtgcaagtctccccccgccatcgcagccgccgccccgtttgac
atggagatccgcgacatggagcagtgcaccgctactcaggagaaggcccctttaccagag
accgccatggaccagggaggagaggctcacagagaggagcgggaggggcatgcggcgcac
tccgaaacgcaaggcaacgtccaggaaatgacaacagaggagcaggaagtgacctcgcca
acggaggaggagaaagcgagggctggcgaaaccgacatgacccactga

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