Coregonus clupeaformis (lake whitefish): 121571045
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Entry
121571045 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121571045
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121571045
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121571045
09158 Development and regeneration
04382 Cornified envelope formation
121571045
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121571045
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121571045
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571045
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121571045
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121571045
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121571045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Y_phosphatase2
DUF6816
Motif
Other DBs
NCBI-GeneID:
121571045
NCBI-ProteinID:
XP_041738222
LinkDB
All DBs
Position
1:complement(57113926..57120715)
Genome browser
AA seq
447 aa
AA seq
DB search
MAGVVGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNHSGEFLATGDKGGRVVIFQHEQE
CKNRPHLRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNSAHFLLSTNDKTIK
LWKISERDKRAEGYNLKDEDGRLRDPFRITSLRVPVLMPMDLMVEASSRRVFANAHTYHI
NSISVNSDHQTYISADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAECQPNQCN
VFVYSSSKGTIRLCDMRAAALCDRHTKFFEEPEDPSSRSFFSEIISSISDVKFSHSGRYM
MTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSAIMTG
SYNNFFRMFDRNTRKDITLEASRESSKPRGTLKPRKVSTGGKRKKDEISVDSLDFNKKIL
HTAWHPKENVIAVAATNNLYIFQDKIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttgtcggtggaaatgattttcagtggtgtttctcacaagtgaagggggca
atagatgaagatgttgcggaagctgatataatctcaacggttgaattcaaccattctgga
gagtttctagcaactggagacaagggaggcagagttgtcatatttcaacatgaacaggag
tgtaaaaatcggccacacctgcgaggagaatacaacgtctatagcacatttcagagtcac
gaacctgaatttgactacttgaaaagtttagaaattgaggaaaaaattaacaaaataaga
tggttaccccaacaaaactcggctcactttctgctatcaacaaatgataaaacgatcaaa
ttgtggaaaatcagtgaacgagacaagcgggctgagggttacaacttgaaagatgaagat
ggacgtctcagggatccctttagaattacctccctgcgggtaccagtgctgatgcccatg
gatctcatggtagaagcaagttctcggagggtgtttgccaacgctcacacgtatcatatt
aattcaatttctgtaaatagcgatcatcaaacgtacatctccgctgatgacctaagaatt
aacctatggcacttggaaatcactgacagaagctttaacattgtagacatcaagcctgct
aacatggaggaactgacagaggtgatcacagctgctgagtgccagccaaaccaatgcaat
gtatttgtgtacagcagtagcaaaggcaccatacgcctctgtgacatgcgagcagcagca
ctctgcgataggcacactaagttctttgaggagcctgaggatccaagcagcaggtcgttc
ttctctgagatcatctcgtccatctctgacgtgaagttcagtcacagcgggcgctacatg
atgacacgggactacctctccgtcaaggtgtgggacctcaacatggagaacaggccagtc
gagacatatcaggttcacgaataccttcgcagcaagctctgctcattgtatgaaaatgac
tgcatcttcgacaagtttgagtgctgctggaacggtagcgacagtgccatcatgactggc
tcctacaacaacttcttccggatgtttgaccgcaacaccaggaaggacattacactggag
gcctccagggagagcagcaaaccgcgtggcacactcaaaccccgcaaagtctccaccggt
ggcaagaggaagaaagacgaaatcagcgtggacagcctggacttcaacaagaagatcctg
cacaccgcctggcaccccaaagaaaatgtaatcgctgtggcggccaccaacaacctgtac
attttccaggataagatcaactaa
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