Coregonus clupeaformis (lake whitefish): 121571085
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Entry
121571085 CDS
T08357
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571085
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Others
Others
121571085
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
DUF6786
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
121571085
NCBI-ProteinID:
XP_041738274
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Position
8:10534802..10897578
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AA seq
1135 aa
AA seq
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MARTMVLLRPKETVSAHLYRAVFIASAWMSLMGPVRCDSGVLHRSDGHRMLDSGVGVGRD
RREGMFGHDLGDNDGDVESPRFRRALSQEKVSLLSSSFVLKGDATHNQAMVHWTGENSSV
ILILTKYYHGDSSKVLESSLWRSIDYGTTYTKLNLMPGTTIVVSNFYICPSNKKKVILVS
SSINERDQLLFISTDEGSSFQSQPLSFTAETLLFHPKEEDKVLAYCKEGKLYVSMDLGRK
WTLMQERVTKDRIFWSVADVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMVTAQFLGK
IDHNSLSVQDDYIFVKVTTGNRTKHYVSYRRNEFVQMRFPKYALPKDVHIVSTDEKQVFL
ALQEWYQTDTYNLYQSDPQGVYYSMVLENVRSTKQPEESVLIDILEVRGIKGVFLANQKV
DGKVRTLITYNKGRDWEPLAPPTTDMTGKPVNCKSPDCHLHLHLRWADNPYVSGTVHTKD
SAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILFLDHGGVIVAIKDTSI
PLKILKFSIDEGHTWTIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDF
RQSFPRQCTEGDYDSWKLTDLQGEKCIMGQERSFRKRKDTAFCIKGKSYTSALTAKPCQC
SEKDFNCDYGFERAQSLKTEGDRCFADFWHDPDSPPDDCHLGHDFESSTGYRKVVSNVCE
GGVNKQQSAKQHTCPLLPPRGLQLGIKGQMLAVAPGDDITFIVHQEQGDTSSTKYQVDLG
DGMRAIYQNLTVTDKPIQHRYEQQGVYHVTVKAENIAGHDQATIYIQVTAPLQEVHLEVV
PIAGINQEVNLTAVVLPSEANLTVFYWWIGDNLQPKMSLENSLITRFPEEGEVSVTVQAS
NGRSMVQDAKNVHVYDRFQVIPLAFSSNLDKLNPNIPEWREDVGQVVTKILAKITGIPQE
SLVTMVKRGLPTTADLYVLPPESKGAKRSVFVDKRIPAIKQAFNENNVSFIVRGGLQVLV
TLADPNAGSQGGVAGPGVWALAVMFLISLLATGSFILYKFKSKLPGRNVYAQMHNEKEQE
MTSPVNHSEDTQHIIQGEEFIDDDLDSQTLGNAEGNHSGVVLSINSRELHSYLTS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaaccatggtacttctgcgtccgaaagaaaccgtttcagcgcacctgtaccgg
gctgtgtttatcgcctcggcttggatgtcactgatgggacccgtgcgatgtgacagcggc
gttttacaccggagcgacgggcatcgtatgcttgacagcggtgtcggtgtaggcagagac
aggagagagggaatgttcggacatgacttgggtgataatgatggggacgtggaatccccg
cgcttcaggagagcgctatcccaagagaaagtgtccctgctcagcagctcgttcgtgctc
aaaggggatgccactcacaaccaggcgatggttcactggacgggggagaacagcagcgtc
attctcatcctgaccaagtattaccatggtgactccagcaaggttctggagagttccctc
tggagatccattgactatggcaccacctacacaaagctcaacctgatgcctggtacaacc
atcgtggtttctaacttctacatctgccccagcaacaagaaaaaggtgatcctggtgagc
tcttccattaacgagcgggaccagttgctgttcatcagtacagacgagggctcctctttc
cagagccagcccctctccttcactgctgagaccctcctcttccaccctaaggaggaggac
aaggtgctggcttactgcaaggagggcaagctctatgtgtccatggatttgggccggaag
tggactctcatgcaggaacgagtaaccaaggacagaatattctggtctgtggctgatgta
gatgtggaccctgacttggtgcatatggagatgcaggacacaagtggagggtacctgtat
gtaacttgtctgatccagaactgctcagacaagatggtgacggctcagttcctggggaag
atcgaccacaattctctctctgtccaggacgactacatctttgtcaaggtgaccacagga
aatcgcaccaagcactacgtctcatatcgacggaacgagtttgtccagatgaggttccct
aaatacgccctaccaaaggacgtccacatagtgagtactgatgagaagcaggtgttcctg
gccttgcaggagtggtaccagacagacacctacaacctgtaccagtcggacccgcaagga
gtttactactccatggtgttggagaacgtccgcagcaccaagcagcctgaggagagcgtc
cttatagacatcctggaggtccgtgggatcaagggggtcttcctggccaatcagaaggtg
gatggcaaagtgaggactctcatcacctataacaaaggccgagactgggaaccgctagcc
ccgcctaccactgacatgaccggcaaaccggtcaactgcaaatcacctgactgtcacctc
cacctccacctgcgctgggctgacaacccctacgtatcagggaccgtccacaccaaagac
tccgcccccggactcatcatgggcgcaggtaacttgggttcccagctggtggagtataaa
gaagagatgtacatcacctctgactgtgggaagacctggaggcaggtgtttgaggaggag
catcacatcctgttcctggatcatggaggggtcatcgttgccatcaaagacacctccatc
cctctcaaaatacttaagttcagtattgatgagggacacacctggaccatccacaacttc
acaagcacctcagtgttcgtggacggacttttgagcgagccgggagacgagacgttggtc
atgacggtgtttggtcacatcagctatcggtcagactgggagctggtcaaggtggacttc
agacagtcattccccagacagtgtaccgagggagactacgactcctggaaactcacagat
ctgcagggagagaagtgcatcatgggtcaggagaggagtttcaggaagaggaaggacact
gcgttctgcatcaaggggaagagctacacctccgccctcaccgccaagccctgccagtgc
tccgagaaagacttcaactgtgactatgggtttgaacgtgcccagagcctcaaaacagag
ggagatagatgcttcgctgacttctggcacgacccagactcaccgcctgatgactgccac
ctgggacacgactttgagtccagcactgggtacaggaaggttgtgtccaacgtgtgtgag
gggggagtgaacaagcagcagagtgccaagcagcacacctgtcctctgctgccccccaga
ggcctccagctgggcatcaaaggacagatgctggctgtggcgcctggtgatgacatcacc
ttcatcgtccaccaggagcagggtgacaccagcagcactaagtaccaggtggaccttggg
gacgggatgagggccatttaccagaacctgacagtgacagacaaacccatccagcaccgt
tacgaacagcaaggggtgtaccacgttaccgtcaaggccgagaacattgccggacacgac
caggccaccatatacatccaggtcacagcccctctacaagaagttcacctggaagtagtt
cccatcgccgggattaaccaggaagtcaacctgacagctgtggtgcttccctctgaggcc
aacctgactgtcttctactggtggataggagacaacctacagcccaagatgtccctggag
aacagtctgataacgaggttccctgaggaaggagaggtgtctgtcactgtccaggcctct
aacggacgctctatggtgcaggacgccaagaacgtccacgtctacgaccgtttccaggtc
atccccctggccttcagcagtaacctggacaaactcaaccccaacattccagagtggagg
gaggacgtgggtcaggtggtcaccaagatattggcaaagatcacaggtatcccccaggag
tccctggtaaccatggtgaagcggggcctgcccaccacagctgacctgtacgttctccca
ccagagagcaagggcgctaagaggagtgtgtttgtggataagcgtatccctgccatcaag
caggccttcaatgagaacaacgttagcttcatcgtacgaggaggtctacaggtgttggtg
acgctagctgaccctaacgcaggttctcagggtggagtggcaggtcctggtgtctgggct
ctggctgtcatgttcctcatcagcctcctcgctaccggatccttcatcctatacaagttc
aagagcaagctgcccggccggaacgtgtacgcccagatgcacaacgagaaggagcaggag
atgaccagccctgtcaatcacagcgaggacacgcagcacatcatccagggggaggagttt
atcgacgacgacctggactcgcagactctaggtaacgcagaaggtaaccactcgggcgtg
gtgctgagcatcaactctagagagctgcacagctacctgacaagctga
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