Coregonus clupeaformis (lake whitefish): 121571106
Help
Entry
121571106 CDS
T08357
Name
(RefSeq) reticulon-1 isoform X1
KO
K20723
reticulon-3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571106
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571106
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121571106
Autophagy
ER-phagy
ER-phagy recepters
121571106
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121571106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
WHD_Egal
TetR_C_5-like
Babuvirus_MP
Motif
Other DBs
NCBI-GeneID:
121571106
NCBI-ProteinID:
XP_041738335
LinkDB
All DBs
Position
8
Genome browser
AA seq
1050 aa
AA seq
DB search
MFMPSSSFPSLPPCMADADKRVVLGSDKPSSEGVATSLRFARPSQPSSFSPTNYGSDPSG
QPDRKPDDSPTVTSPVSERIKALEALAAKEPEPKNDGGFPHFKERHYETSPTEAPTESTS
PFQKKGASIDLESPESPFEVVGEVRQGSEFEDTADWMRAHLPPVPDFEDALVSEEDGKSQ
EIKVADKVVPDDPEAFACVPDAFMDSPIERPELKNVFKDPAQQSSVEEESEFDLSFLPKA
YVTDTQGPADLDSELPASPAPPAPPAGFDSPSPSPPSDSKEKDLKTKQAPWGGDLELPEV
VDSSGDSEDTVIEDIASIPAPSSSSDTTPAPNPSVPSLPTEEKETLPAKQPMRVPTINVI
ETDEPNYSEMEMEMEEEGDEVVEGPVKEAPKTPEPQPDVTRCDKIPPLEYDCYSPPSSPV
DSDDEYSPKHKILKSECNTDNQKTTAPNDGSKGSSAEVSQAQKVESDQSQTPNESNENSS
PSTAKPSKKTAENLSDFPEYDDDDWSTGAQDILIKSSSANITAQDLPLRPSSKFEEKPES
DIKGDYMQTVELSKSNYMQDDGIRKYDRQSFEDEDALPSMDDTIDAKELNFDTVHEPSPS
DPTSQIHIGTLLPQNNATTMEQDITSMAEEDSFPKPVGGQPSPREFPKDPFASFQSKLPG
STLEPKPEKKPNDDIIADSIVNSKTLPPQDAGAKEDTDAGHHSTDNTSDPESIEPDCSVS
GATDSFVEFMRECLKSRQDEDPEDLHQGLTAKDECHKTGAPPSQSTPSVGMDLEQERLTI
NALKELGSSQEEEADFHSSIKASEKSQSSFISTTSDPPSPQNKPASGGAYSKEVEAIDVW
VAEAYHLAEHVLAAMLTHLSVKDLVHWRDPKKSGVVFGLSLLTLLSLAAFSVISVISYLL
LALLCVTISFRIYKAVVQAVQKSNDGHPFKALMEKDVSVPPETFRKHVDVSLTYINRFLK
QMSKLFLVEDLIDSLKMAVVMWLLTYVGAVFNGITILILADILLFAVPPFYEKNKTQIDH
YMEITRTQVNTTMAKLQEKLPGAIKRTKAE
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgccctcctcctcctttccttccctgcctccgtgcatggccgatgcagacaaa
agggtggtgctgggctctgacaagccctcctcagaaggggtggccacctcccttcgcttc
gccaggccttctcaacccagttcgttttctcccactaactacgggagcgacccatcaggt
cagcccgacagaaagccagatgattcaccgacagtgacgtcccccgtgtctgagaggatt
aaggcactggaggccctggcagcaaaggagcccgagcccaagaacgacggcggcttccct
cacttcaaagagcgccactatgagacgtctcctactgaggcgccgacagagagcacctca
cccttccagaaaaaaggagcctccattgatctggaatcaccagaatccccctttgaggtc
gtgggagaagtccgacaagggagtgagtttgaagatactgcagactggatgagagctcac
ttaccccctgtgcctgactttgaagatgctcttgtatcagaggaggatggcaaatcccaa
gagataaaagtggcagataaagtggtacctgatgatccagaggcatttgcctgtgtccct
gacgctttcatggactctcccattgaaaggcctgaactgaaaaatgtgttcaaagaccca
gcgcagcagtctagcgtcgaggaagaatctgaatttgacctgagcttcctacctaaagct
tacgtgacagacacccaaggccctgctgaccttgactctgagctccctgcctctcctgcc
cctcctgcccctcctgctggttttgactctccctctccatcccctccctctgactctaaa
gagaaggatttgaagaccaagcaggccccatggggtggtgacctggagctcccagaggta
gtcgacagctcaggagactcggaggacacagtcatcgaggacatagcctccattcctgcc
ccctcttcgtcaagtgatactacacctgcccccaacccctctgttccctccctccctact
gaagaaaaagaaaccctgccagcaaagcagccaatgcgggtccctaccatcaatgttatc
gagacggacgagccgaattacagcgagatggaaatggaaatggaggaggaaggtgatgaa
gttgtagaaggccctgtgaaagaggcaccaaaaacacctgagccgcaaccagatgtaact
agatgtgacaaaattcctcccttagaatatgattgttactctcctccctcctctccggtc
gactctgatgatgaatactcacctaaacacaagatcctcaaatctgaatgcaatacagat
aatcaaaagaccacagcacctaatgatgggtcaaagggctccagtgctgaggtttcacaa
gcacagaaagtagagtctgatcaatcacagacccccaatgagtctaatgaaaattcttca
ccttccactgccaaaccttctaagaaaaccgcagagaacctttcagactttccagaatat
gatgacgatgactggtcaactggcgcacaagatatcttaattaaatctagctctgctaac
attacagctcaggatcttccacttcgcccctcatccaagtttgaagagaagccagagtct
gatattaaaggggattatatgcagacagttgagctttcaaaatccaactacatgcaggat
gacggaatccgtaaatacgacagacaatcttttgaggacgaagacgcactgccatccatg
gatgacaccattgatgctaaagagctgaactttgacacagtacatgagccttctccttcc
gatccaacctcacagatccatatcggaacactactccctcaaaacaatgcaaccactatg
gagcaggatatcacctcgatggctgaagaggactccttccccaagccagttggaggccag
ccatctcccagggagtttcccaaagatccatttgcctctttccagagcaaactgcctggc
agcaccctggagcccaagcctgagaagaaaccgaacgatgacatcattgcagatagcatt
gtcaacagcaagacgcttccacctcaggacgctggggcgaaggaggacactgacgcagga
caccattcaacagacaacaccagtgacccagaaagcattgagccggactgctcagtctct
ggtgccacagacagcttcgtcgagttcatgagggagtgcctgaagtcacgacaggacgaa
gatccagaagacctccatcaaggtctcacagccaaggatgagtgtcataaaacgggtgcc
cctccctcccagtccacaccctccgtgggcatggatctggagcaggaacgcctcactatc
aatgcactcaaagagttgggcagcagccaagaggaggaggctgacttccattctagtatc
aaggcttctgagaaatcccagtcttcctttatatcgacaacctccgaccctccttctccc
caaaacaaacctgcttccggcggcgcatattccaaagaggtagaggccatcgacgtgtgg
gtggcagaggcctaccaccttgcagagcatgtcttggcagcaatgctaacgcacttgtca
gtcaaggacttggtgcactggcgagaccccaagaagtcgggcgtggtgttcggcctgtcc
ctgctgacgctcctgtccctggcggcgttcagcgtcatcagcgtgatctcctatctgctc
ctcgctctgctctgtgtcaccatctctttccgcatctacaaggctgtcgtccaggccgtg
cagaagtccaacgacggacaccccttcaaagctctgatggagaaggatgtcagcgttccc
cctgagaccttccgcaagcacgtggacgtcagtctgacctacatcaaccgattcctaaaa
cagatgagcaaactcttcctggtcgaggacctcatcgactccctaaagatggctgttgtg
atgtggctgctgacctacgtaggagccgtcttcaacgggatcaccatcctcatcctggct
gacatcctcctcttcgccgtaccccccttctatgagaagaacaagacccagattgatcac
tacatggaaatcacacgtactcaagtcaacaccacaatggccaagctgcaagagaaactc
cctggagccatcaagcgtacgaaagctgaatga
DBGET
integrated database retrieval system
