Coregonus clupeaformis (lake whitefish): 121571110
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Entry
121571110 CDS
T08357
Name
(RefSeq) RNA-binding protein 4.1 isoform X1
KO
K13187
RNA-binding protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121571110
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121571110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
RRM_7
Calcipressin
zf-CCHC_3
RRM_occluded
zf-CCHC_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
121571110
NCBI-ProteinID:
XP_041738343
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All DBs
Position
8:12304438..12312796
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AA seq
433 aa
AA seq
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MVKIFIGNLSPDTTAEELRSLFSQYGKVSECDIVKNFGFVHMNVKAEAEEAIKNLHHYEL
NGEQMNVEMSRGRPKASTKLHVGNINSSCTNQELRAKFEEYGPVVECDIVKDYAFVHLER
VEDAMEAISGLDNTAFQGKLMSVKLSTSRLRTAPGMGERTGCYRCGQEGHWSKECPLDTL
GNYREGAEPSSDGFNGGAPRFGGGSRGGRGYHRGLSGSNPGYSGGDPGYSGSYAPAHGFG
SRESAYGSGRVPVYGRGAGYESALSYGVPPGYGMSAAEHSMARVYASEAAYGGSSWSHGV
VPAYPVRRSSYEDRDPYGAVDFYEKYRARPYGGSYFEERRSVPLPGPPPPSSSAIMRERL
PPSSLDLYERRPLPSPPAPLSSYYSRDRSPIRRIPTEAYAYERARLSPVSSLPRSSAYDI
PRDPYAERARYAY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatcttcatcgggaacttgtctccagacaccacggcagaggagttgcgttcc
ctcttctcccagtatggaaaggtctcagagtgtgacatcgtcaagaactttggctttgtg
cacatgaatgtcaaagccgaagcggaggaggccatcaagaacctccaccactatgagctc
aacggggagcagatgaacgtggagatgagccgcggcagacccaaagcctccaccaagctg
cacgtgggcaatatcaacagcagctgcaccaaccaagagctgcgtgccaagtttgaggag
tacggccccgtggtggagtgtgacatagtcaaggactacgcctttgtccacttggagcgt
gtggaggatgccatggaggccatcagtggattggacaacacagccttccaaggcaaactg
atgagcgtgaagctttcgactagccgcctgcgtactgcgccgggcatgggagagaggacg
ggttgttatcggtgcgggcaggaaggccactggtccaaagagtgcccgctcgacacgttg
ggcaactacagagagggtgctgagccaagctctgacggattcaatggcggtgcccctagg
ttcggcgggggcagtcgcggtggccgcggttatcaccggggcttgagtggcagcaatcca
ggttacagtggcggtgatccaggttacagtggaagctatgctcccgcgcacggcttcggc
agcagggagtctgcttacggcagcggccgtgtgcccgtgtacggcaggggcgcaggctac
gagagcgcattgagttacggggtcccgccgggttacggaatgagcgccgccgaacatagc
atggcccgggtgtacgccagcgaggcagcgtacggaggcagcagctggagccacggcgtg
gtcccagcctaccctgtgcgccggtcatcgtatgaggaccgggatccgtatggcgccgtg
gacttctacgagaagtaccgggctcgcccgtatggaggcagttatttcgaagagcgccgg
tctgtccctttgcccggcccacctcccccttcctcctcggccataatgagggagcgcctg
ccaccctctagcctcgacctatacgagcgccgtcccctcccttctccaccagcccccctc
tcctcatactattcccgcgaccggagcccgatccggcgaatccctaccgaggcctacgca
tacgagcgcgcgcgcctctccccggtgtcctccctccccagaagctcggcttacgacatc
ccgcgggacccctatgccgagcgggcgcgctatgcttactaa
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