KEGG   Coregonus clupeaformis (lake whitefish): 121571111
Entry
121571111         CDS       T08357                                 
Name
(RefSeq) splicing factor 1 isoform X1
  KO
K13095  splicing factor 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121571111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cclu03041]
    121571111
Spliceosome [BR:cclu03041]
 Complex A
  Other components
   Complex A specific factors
    121571111
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1 zf-CCHC KH_12 SLU7_N zf-CCHC_3 Nlp-28-30
Other DBs
NCBI-GeneID: 121571111
NCBI-ProteinID: XP_041738349
LinkDB
Position
8:12324600..12338981
AA seq 687 aa
MATGANATPLGKLHPSIGAKRGFDSGPGAGFMPPPGPPVSFPSLPNFQPPIPNVSFPQAH
PVFTAVAAFPTPPQPPQGAGMQSQSDFGQKKARKRSRWSSETPDQKTVIPGMPTVIPPGL
TRDQEKAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPVYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHSNNQN
SGNNRGNNNNNQPPPSRPPWMNSGQSENRNFHSMHGGHGGHGGHGNQHGGHGNHGGHGGH
GGHHNFPPPMSNMGGHPMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMMPPPPPPPN
NQPPPPPSGPLPPWQQQAPPPPPTSSMASSAPLPWQQNTTTTSSPGTGNLPPWQQPQQSA
ASAAQPPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPSNF
VTMMGMGVPGMPPFGMPPAPPPPPPQN
NT seq 2064 nt   +upstreamnt  +downstreamnt
atggctacgggagcaaatgcaacccctctagggaagctgcacccgagtattggcgctaaa
cgaggctttgattccgggcctggtgcggggtttatgcctccacccgggcctcctgtgtcc
tttccttcgctaccgaatttccagccaccaattccaaacgtctctttcccgcaagctcac
ccggtgtttactgcggtggctgcttttcccaccccgccacaaccaccccaaggagccgga
atgcagtctcagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggagtagt
gaaacacccgaccagaagacagtcattcctggtatgcccaccgtcatcccgcctggactg
actcgggatcaggagaaggcctatatagtccaactgcagattgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacaggtccccgtctccagag
cccgtctacaacagcgaggggaagaggctgaacaccagggagtaccgcacacgcaagaag
atcgaggaggagcgtcactccctcatcaccgatatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagccaccagggtcaacgacaaggtgatgattccacag
gacgagtacccagagatcaactttgttggcctgctgattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggcaagggctctgtgaag
gagggcaaggtgggccgtaaggacggccagatgctgccaggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggccgtggaacagatccgcacc
atcctcaagcagggcatcgagacccccgaggaccagaacgacctgaggaagatgcagctg
agggagctggccagactcaacgggaccctgagagaggacgacaacaggattctgcgtccg
tggcagagcactgaaccccgcagcgtcaccaacacaaccctctgtacaaagtgtggcggc
gcaggccacatctcctccgactgcaagttcaccagctcctttgcggcgcccagggccggt
gagcccccccagtctgcccaggacaaggcccgtatggacaaggagtacctgtccctcatg
gcggagctgggcgaggcccctgtgcccacctctggcgggggacactccaacaaccagaac
agtggcaacaacagaggcaacaacaacaacaaccagccgccaccgagccgtcctccctgg
atgaactctggccagtctgagaacaggaacttccacagcatgcacggaggccacggcgga
cacggtggtcatgggaaccaacacggtggtcatggcaaccatggaggtcatggaggtcat
ggaggccaccacaacttcccaccccccatgtccaacatgggagggcaccccatgcccccc
aacaatggcatgccacccccgtggatgcagcccccaccgccccccatgggccagggacac
ggacaccatatgggtctgttgcctccacccatgatgccgccaccacctccacccccgaac
aaccagcctcccccaccaccgtcaggtcccctgcctccatggcaacagcaggcccctcca
ccccctcctaccagcagcatggcctctagtgcaccactgccatggcaacagaataccacc
acgacgtccagtcctggcactggtaacctgcccccctggcagcagccccaacagtccgct
gcctcggccgcccagccccctccccccatgggcaacccctcaatggtcccccctccgccc
ggggtccagccacctctcccccccggcgccccacctccccctcctcccccaccccccggc
tcagccggcatgatgtacgcccctccacccccccctccgcccatggatccctccaacttt
gtcaccatgatggggatgggggtgccaggcatgccccccttcggtatgccccctgcgccg
ccacctccacccccccaaaattaa

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