Coregonus clupeaformis (lake whitefish): 121571120
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Entry
121571120 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-2
KO
K07377
neurexin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121571120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571120
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121571120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
121571120
NCBI-ProteinID:
XP_041738358
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All DBs
Position
8:600033..1312575
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AA seq
1341 aa
AA seq
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MLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHA
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKD
VVYKNNDFKLELSRLAIERDPKISLNGDLVFRCEDVAALDPVTFESPESFIALPKWNTKK
TGSISFDFRTTEPSGLLLFSHGRPQGTKEQKLGRDKKSDYFAMELLDGFLYLLMDMGSGS
IKLKTSNKKVNDGEWCHVDFQREGRKGSISVNSRSIPFNSNEGSEILDLDSDMFLGGLPE
ARSDLVLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSSPGVSSFCTRELQKRC
SSAPCGNGGLCKEGWNRYICDCTGTGYLGSNCEIEATVLSYDGSMYLKIIIPGTMHTEAE
DVALRFMSQRAYGLLMATTSKESADTLRLELDGGRIKLTVNLDCIRIDCNLSKGPETVFA
GQKLNDNEWHTVKVVRRGKNLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFISMV
PSNFIGHLQGLTVNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKASYLALATL
QAYASMHLFFQFKTTTSDGLLLFNSGDGSDFIIVELVKGYVHYVFDLGNGPSLMKGNSDK
PLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVGKSMYNSLPK
LIASRDGYQGCLASVDLNGKLPDLIADALHRMGQVERGCDGPSTTCTEDSCYNQGVCLQQ
WEGFSCDCTMTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQLK
DAVLLRVESAKGLGDYLELHIEQGRIGVIFNVGTDDIIIEESAVMVSDGKYHVVRFTRSG
GNATLQVDSQPVIERFPSGRQLTIFNSQAFIKIGGGGGDKARHFQGQISGLYYNGLQVLK
LAAEGDPNVQAQGNLRLVGDVPSVLTTDTTSTTPLADMSTTIMETTTTMATTTTRKQRSP
TMRDSVTQNTDDILVASAECPSDDEDLEECEPGNGGELVLPIITVDSLDPPYATRYPVIP
PPPTYRPFLETTKESLPLPNGRPPCPLDQEDCEEAGPIEVSAYGSGEMTESDDEDYYKNS
PLVTDRTVLPPPPNEGSVQNPRDRHFSHRPPLSSTPTANPDQLGPRLNKPGGSSSNIPAG
KMNTRDQVLLPPAHPSSDPDRHRHVPGVTYPPNFPHVPTQDPTSPERGGPPGAVEVIRES
SSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGTLVKEK
QPGTAKTTTKNKKNKDKEYYV
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacacgggcaagtcggctgactacgtcaacctgtcgctgaagagcggcgccgtc
tggctggtcatcaacctgggctcgggcgccttcgaggcgctagtggagcccgttaatggg
aagttcaatgacaacgcctggcacgatgtgcgcgtcacacgcaacctgcgccagcacgca
ggcattggacacgctatggtgaccatatcagtggatggtattttgaccactactggttat
acccaggaggactacaccatgttgggctcagatgacttcttctacattggggggagtccc
aatactgcggacctgcccggatcacccgtcagcaacaacttcatgggctgcctcaaagac
gtggtgtacaagaataacgacttcaagctagaactctcccggctagccatcgagcgggac
cctaagatcagcctgaacggagatcttgtcttccgctgtgaggacgtggccgccctggac
ccagtcaccttcgagtccccggagtccttcattgccctgcccaagtggaacaccaagaaa
acaggctccatctccttcgacttccgcaccaccgaacccagcggcctgctcctgttcagc
cacgggcgcccccagggaactaaagagcagaaactaggtcgggacaagaagtcagactac
ttcgccatggagctgctggatgggtttctctacctgctcatggacatggggtctgggagt
atcaagctgaagaccagtaataagaaggtgaacgacggggagtggtgccatgtggacttc
cagagggaaggaaggaaaggctccatctcagtgaacagccgcagtatccccttcaactcc
aacgagggcagtgagatcctggacctggacagcgacatgttcctggggggtctccccgag
gcccgctctgacctggtgctgccccccgaggtctggaccgccctgctcaactacggctac
gtgggctgcgtccgcgacctcttcatcgacggcaagagccgcgacgtgcgccgcctggcc
gagatccagagctccccgggcgttagcagcttctgcacccgcgagctgcagaagaggtgt
agcagcgccccctgtgggaacgggggcctgtgtaaagagggatggaaccgctacatctgc
gactgcaccggcaccggctacctgggcagcaactgtgaaatcgaggcgacggtgctgagc
tacgacggcagcatgtacctgaagatcatcatcccaggcaccatgcacactgaggcagag
gacgtggcgctacggttcatgtcccaacgggcctatggcctcctcatggccaccacctcc
aaagagtccgccgacacgctgcggctagagctggacggtggcaggatcaagctgaccgtc
aatctagattgtatcaggatagactgtaacctcagtaaaggacccgagacggtcttcgcc
ggccaaaagctcaacgacaatgagtggcacacggtgaaagtggtgcgcagaggaaagaac
ctccagctctctgtggacaacgtgacggtagaaggccaaatgacaggtgcccacacccgt
ctggagttccacaacattgagacgggcatcatgacagagcgccgcttcatctccatggtg
ccctccaacttcatcggtcacctccaaggcctgacagtcaatggcgtgccctacctggac
cagtgcaagaacggcgacatctcctactgtgaactcaacgcccgcttcggcatgcgccac
atcatcgccgatccagtgacgtttcgaacgaaagcgagctatctagcgttggctactttg
caggcctacgcttccatgcacctcttcttccagttcaagaccaccacgtcggacggcctg
ctgctcttcaactcgggggacggcagcgacttcatcattgtggagctggtcaaaggctac
gtccattatgtctttgacctcggcaatggtccgtcgctgatgaagggcaactcggacaag
ccactcaacgacaaccagtggcacaacgtggtggtctcccgggacgccaacaacgtgcac
acgctcaagatcgactcacgcaccgtcacccagcactccaatggagcccgcaacctggat
ctcaaaggggagctgtacatcggtggcgtggggaagagcatgtacaacagtctgcccaag
ctgattgcgtcccgggacgggtaccagggctgcctggcctcagtggacctcaacgggaaa
ctgccagacctgatcgcagacgccctccacaggatgggccaggtggagcgagggtgcgac
ggacctagcaccacctgtacggaggactcctgctacaatcagggcgtgtgtctccagcag
tgggagggtttctcctgcgactgcaccatgacgtcctatggaggctccttctgtagcgac
cctgggacaacctacatcttcgggagaggaggagccctcatcacgtacacctggcccccc
aacgaccggcctagcacgcgggcagaccggctggcggtgggcttcagcacgcagctcaag
gacgccgtgctgctcagggtggagagtgccaagggactgggagactacctggagctgcac
atagaacaaggaaggatcggcgtcatcttcaacgtgggaacggacgacatcatcatcgag
gagagcgcggtgatggtgagcgacggcaaataccacgtggtgcgcttcacgcgcagcggt
ggcaacgctaccctgcaggtggacagccagcccgtcattgaacgcttcccctcaggtcga
cagttgaccatcttcaacagccaggcgttcatcaagatcggaggtggtggcggcgacaag
gctcgtcacttccagggccagatctcaggcctctactacaacgggctgcaggtgctcaag
ctggcggccgagggcgaccccaacgtgcaggcccagggcaacctgcggctggtgggcgac
gtgccctcagtgctcaccacggacaccaccagcaccacgccgctggctgacatgtccacc
accatcatggagacaaccaccacaatggctaccaccaccacccgcaagcagcgctcaccc
accatgagggacagtgtcacacagaacacggatgacatattggtagcgtctgctgagtgt
cccagcgatgacgaggacttggaggagtgtgagcctggaaatggaggtgaattagtgttg
cccataataactgtggactcactagaccccccctatgccacccgctaccccgtaatcccc
ccgccccccacctatcgccccttcctcgaaaccaccaaagagtccctccccctgcccaac
ggtcgccccccctgcccactggatcaggaggactgcgaggaggcggggcccatcgaggtg
tccgcctacggctcaggcgagatgactgagtcggacgacgaggactattacaaaaactcc
cccctcgtcaccgataggacggtcctcccccctccccccaacgagggcagtgtccagaac
ccccgcgaccgacacttctcccaccgcccccccctgtcgtccacccccacggccaacccc
gaccagctaggtcccaggctcaacaagccgggcggcagcagcagcaacattcccgccggc
aagatgaacacccgggatcaagtgctgctgccgcccgcccacccctcttccgaccctgac
cgccaccgccacgtcccgggcgtaacctaccctcccaatttcccccatgtgcccacccaa
gaccccacgtccccggagagaggagggcctcccggcgcggtagaggtgatcagggagtcc
agcagcaccactggcatggtggtgggcatcgtggcggccgctgccctctgcatcctcatc
ctactctatgccatgtacaagtaccgtaaccgtgacgagggctcctaccaggtggaccag
agccgtaactacatcagtaactcggccacgcagagcaacggcaccttggtgaaggagaag
cagccgggcacagccaagacaaccaccaagaacaagaagaacaaagacaaggagtactac
gtctga
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