KEGG   Coregonus clupeaformis (lake whitefish): 121571120
Entry
121571120         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-2
  KO
K07377  neurexin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    121571120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121571120
Membrane trafficking [BR:cclu04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    121571120
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF Syndecan
Other DBs
NCBI-GeneID: 121571120
NCBI-ProteinID: XP_041738358
LinkDB
Position
8:600033..1312575
AA seq 1341 aa
MLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHA
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKD
VVYKNNDFKLELSRLAIERDPKISLNGDLVFRCEDVAALDPVTFESPESFIALPKWNTKK
TGSISFDFRTTEPSGLLLFSHGRPQGTKEQKLGRDKKSDYFAMELLDGFLYLLMDMGSGS
IKLKTSNKKVNDGEWCHVDFQREGRKGSISVNSRSIPFNSNEGSEILDLDSDMFLGGLPE
ARSDLVLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSSPGVSSFCTRELQKRC
SSAPCGNGGLCKEGWNRYICDCTGTGYLGSNCEIEATVLSYDGSMYLKIIIPGTMHTEAE
DVALRFMSQRAYGLLMATTSKESADTLRLELDGGRIKLTVNLDCIRIDCNLSKGPETVFA
GQKLNDNEWHTVKVVRRGKNLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFISMV
PSNFIGHLQGLTVNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKASYLALATL
QAYASMHLFFQFKTTTSDGLLLFNSGDGSDFIIVELVKGYVHYVFDLGNGPSLMKGNSDK
PLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVGKSMYNSLPK
LIASRDGYQGCLASVDLNGKLPDLIADALHRMGQVERGCDGPSTTCTEDSCYNQGVCLQQ
WEGFSCDCTMTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQLK
DAVLLRVESAKGLGDYLELHIEQGRIGVIFNVGTDDIIIEESAVMVSDGKYHVVRFTRSG
GNATLQVDSQPVIERFPSGRQLTIFNSQAFIKIGGGGGDKARHFQGQISGLYYNGLQVLK
LAAEGDPNVQAQGNLRLVGDVPSVLTTDTTSTTPLADMSTTIMETTTTMATTTTRKQRSP
TMRDSVTQNTDDILVASAECPSDDEDLEECEPGNGGELVLPIITVDSLDPPYATRYPVIP
PPPTYRPFLETTKESLPLPNGRPPCPLDQEDCEEAGPIEVSAYGSGEMTESDDEDYYKNS
PLVTDRTVLPPPPNEGSVQNPRDRHFSHRPPLSSTPTANPDQLGPRLNKPGGSSSNIPAG
KMNTRDQVLLPPAHPSSDPDRHRHVPGVTYPPNFPHVPTQDPTSPERGGPPGAVEVIRES
SSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGTLVKEK
QPGTAKTTTKNKKNKDKEYYV
NT seq 4026 nt   +upstreamnt  +downstreamnt
atgctgcacacgggcaagtcggctgactacgtcaacctgtcgctgaagagcggcgccgtc
tggctggtcatcaacctgggctcgggcgccttcgaggcgctagtggagcccgttaatggg
aagttcaatgacaacgcctggcacgatgtgcgcgtcacacgcaacctgcgccagcacgca
ggcattggacacgctatggtgaccatatcagtggatggtattttgaccactactggttat
acccaggaggactacaccatgttgggctcagatgacttcttctacattggggggagtccc
aatactgcggacctgcccggatcacccgtcagcaacaacttcatgggctgcctcaaagac
gtggtgtacaagaataacgacttcaagctagaactctcccggctagccatcgagcgggac
cctaagatcagcctgaacggagatcttgtcttccgctgtgaggacgtggccgccctggac
ccagtcaccttcgagtccccggagtccttcattgccctgcccaagtggaacaccaagaaa
acaggctccatctccttcgacttccgcaccaccgaacccagcggcctgctcctgttcagc
cacgggcgcccccagggaactaaagagcagaaactaggtcgggacaagaagtcagactac
ttcgccatggagctgctggatgggtttctctacctgctcatggacatggggtctgggagt
atcaagctgaagaccagtaataagaaggtgaacgacggggagtggtgccatgtggacttc
cagagggaaggaaggaaaggctccatctcagtgaacagccgcagtatccccttcaactcc
aacgagggcagtgagatcctggacctggacagcgacatgttcctggggggtctccccgag
gcccgctctgacctggtgctgccccccgaggtctggaccgccctgctcaactacggctac
gtgggctgcgtccgcgacctcttcatcgacggcaagagccgcgacgtgcgccgcctggcc
gagatccagagctccccgggcgttagcagcttctgcacccgcgagctgcagaagaggtgt
agcagcgccccctgtgggaacgggggcctgtgtaaagagggatggaaccgctacatctgc
gactgcaccggcaccggctacctgggcagcaactgtgaaatcgaggcgacggtgctgagc
tacgacggcagcatgtacctgaagatcatcatcccaggcaccatgcacactgaggcagag
gacgtggcgctacggttcatgtcccaacgggcctatggcctcctcatggccaccacctcc
aaagagtccgccgacacgctgcggctagagctggacggtggcaggatcaagctgaccgtc
aatctagattgtatcaggatagactgtaacctcagtaaaggacccgagacggtcttcgcc
ggccaaaagctcaacgacaatgagtggcacacggtgaaagtggtgcgcagaggaaagaac
ctccagctctctgtggacaacgtgacggtagaaggccaaatgacaggtgcccacacccgt
ctggagttccacaacattgagacgggcatcatgacagagcgccgcttcatctccatggtg
ccctccaacttcatcggtcacctccaaggcctgacagtcaatggcgtgccctacctggac
cagtgcaagaacggcgacatctcctactgtgaactcaacgcccgcttcggcatgcgccac
atcatcgccgatccagtgacgtttcgaacgaaagcgagctatctagcgttggctactttg
caggcctacgcttccatgcacctcttcttccagttcaagaccaccacgtcggacggcctg
ctgctcttcaactcgggggacggcagcgacttcatcattgtggagctggtcaaaggctac
gtccattatgtctttgacctcggcaatggtccgtcgctgatgaagggcaactcggacaag
ccactcaacgacaaccagtggcacaacgtggtggtctcccgggacgccaacaacgtgcac
acgctcaagatcgactcacgcaccgtcacccagcactccaatggagcccgcaacctggat
ctcaaaggggagctgtacatcggtggcgtggggaagagcatgtacaacagtctgcccaag
ctgattgcgtcccgggacgggtaccagggctgcctggcctcagtggacctcaacgggaaa
ctgccagacctgatcgcagacgccctccacaggatgggccaggtggagcgagggtgcgac
ggacctagcaccacctgtacggaggactcctgctacaatcagggcgtgtgtctccagcag
tgggagggtttctcctgcgactgcaccatgacgtcctatggaggctccttctgtagcgac
cctgggacaacctacatcttcgggagaggaggagccctcatcacgtacacctggcccccc
aacgaccggcctagcacgcgggcagaccggctggcggtgggcttcagcacgcagctcaag
gacgccgtgctgctcagggtggagagtgccaagggactgggagactacctggagctgcac
atagaacaaggaaggatcggcgtcatcttcaacgtgggaacggacgacatcatcatcgag
gagagcgcggtgatggtgagcgacggcaaataccacgtggtgcgcttcacgcgcagcggt
ggcaacgctaccctgcaggtggacagccagcccgtcattgaacgcttcccctcaggtcga
cagttgaccatcttcaacagccaggcgttcatcaagatcggaggtggtggcggcgacaag
gctcgtcacttccagggccagatctcaggcctctactacaacgggctgcaggtgctcaag
ctggcggccgagggcgaccccaacgtgcaggcccagggcaacctgcggctggtgggcgac
gtgccctcagtgctcaccacggacaccaccagcaccacgccgctggctgacatgtccacc
accatcatggagacaaccaccacaatggctaccaccaccacccgcaagcagcgctcaccc
accatgagggacagtgtcacacagaacacggatgacatattggtagcgtctgctgagtgt
cccagcgatgacgaggacttggaggagtgtgagcctggaaatggaggtgaattagtgttg
cccataataactgtggactcactagaccccccctatgccacccgctaccccgtaatcccc
ccgccccccacctatcgccccttcctcgaaaccaccaaagagtccctccccctgcccaac
ggtcgccccccctgcccactggatcaggaggactgcgaggaggcggggcccatcgaggtg
tccgcctacggctcaggcgagatgactgagtcggacgacgaggactattacaaaaactcc
cccctcgtcaccgataggacggtcctcccccctccccccaacgagggcagtgtccagaac
ccccgcgaccgacacttctcccaccgcccccccctgtcgtccacccccacggccaacccc
gaccagctaggtcccaggctcaacaagccgggcggcagcagcagcaacattcccgccggc
aagatgaacacccgggatcaagtgctgctgccgcccgcccacccctcttccgaccctgac
cgccaccgccacgtcccgggcgtaacctaccctcccaatttcccccatgtgcccacccaa
gaccccacgtccccggagagaggagggcctcccggcgcggtagaggtgatcagggagtcc
agcagcaccactggcatggtggtgggcatcgtggcggccgctgccctctgcatcctcatc
ctactctatgccatgtacaagtaccgtaaccgtgacgagggctcctaccaggtggaccag
agccgtaactacatcagtaactcggccacgcagagcaacggcaccttggtgaaggagaag
cagccgggcacagccaagacaaccaccaagaacaagaagaacaaagacaaggagtactac
gtctga

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