Coregonus clupeaformis (lake whitefish): 121571160
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Entry
121571160 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: trithorax group protein osa-like
KO
K04496
C-terminal binding protein [EC:
1.1.1.428
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04310
Wnt signaling pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121571160
04330 Notch signaling pathway
121571160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571160
Enzymes [BR:
cclu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.428 4-methylthio 2-oxobutanoate reductase (NADH)
121571160
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Macropinocytosis
Others
121571160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
NAD_binding_2
Motif
Other DBs
NCBI-GeneID:
121571160
NCBI-ProteinID:
XP_045077961
LinkDB
All DBs
Position
1:58396494..58446235
Genome browser
AA seq
1089 aa
AA seq
DB search
MLVASKQLRIGRSHSWDTLGGNEGQWAGGENVYDQQGRIAGRRNSLSYGGEGGGYYEPTP
GMCPPDLDLKRDTYSYQDSLYSQQGYATDPWGMRKGSVPELNHYDCPPMPHSHRGSIVSQ
DYYPHDPAMVPRPPEDPLGFYRVEQQPQQQPHPLNRSPSHYGMNPVGWPPWDQGHGGRPG
PPGPSSASPLPPPPTAHGINQVYSQPAAVAATAAAKMMPDGQHSPAHYGMEQPSSPRYAS
EPPPLAGQPVYTDVNGHPLVPRRQQPAATCLVVDPNTQGLDGSMQQRGMMIRQECTLPYS
VQQQVPQPNMQVYNPNPPLSSPVPAPAPAPLPLPPAPVALPPPPPTANQTPAASVDPKRN
ADPEFLALLRNEGLSESTISSLIKQGFDTTGMLAVMEENDVRSVAPNLGQARVLSRVAIS
VKRPLEPPPTPQQQDPMRGRSNSFSHRSDMYLQQQQHQQAMGMDPRLMPPQTPGAMQTIS
PTIAEAMARRPNSAPSQHLLETTQGYPGPRTPGTYNGAMVPVQSRPMSAFSQHPGVPMPP
GMQMMAAMPQQMQAMQQQQMPVSMPAQPSPQQAPKAYSTNYTVPMELMKRGRSLQPMSPM
HSAHPNPQMIRKAGGTPSDGAMMPVGTTMQNQSAMATNQKLSRRTGPPVIVSTMASPDTS
IRPQIMNGPMHPRPLVALLDGRDCTVEMPILKDLATVAFCDAQSTQEIHEKVLNEAVGAM
MYHTITLTREDLEKFKALRIIIRIGSGYDNIDIKAAGEMGIAVCNIPSAAVEETADSTLC
HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRSGQAVAVRAK
VFGFNVIFYDPYLQDGLERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQ
MRQGAFLVNSARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFTQGPLKDAPNLICTP
HTAWYSEQASLEMREAAATEIRRAVTGRIPDSLRNCVNKEFFVTTAPWTVEQQQMQQQMH
PELNGAAYRYPPGVVGVASGGIHGPMEGMVPGGVPIAHTLPSGTHPSQAPSPNQPSKHGE
PMREHMTEP
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcgccagcaagcagttgaggatcggtcgttcccacagttgggacaccctggga
gggaatgagggtcagtgggccgggggagaaaatgtttacgaccaacaaggcaggatagcg
ggccgacgaaactcgctgtcttacgggggagaaggaggaggttactacgagcctacccct
gggatgtgtcctccggacctggatctgaaacgagacacctactcctaccaggactctttg
tacagccagcagggctacgctactgatccctggggaatgagaaagggctcagtccctgag
ctaaaccactacgactgtccaccaatgcctcacagtcacagaggatccatcgtctcccag
gactattatccccatgaccctgctatggttccccgaccaccagaggaccccctgggcttc
taccgggtggagcagcagcctcagcagcagcctcacccgctcaacagatccccgtcccac
tacgggatgaacccagtgggatggccaccatgggaccagggacatggagggaggcccgga
cctccgggtccttcatctgcttctcctcttcctcctccgccaactgcccatggcattaac
caggtttacagtcagcctgcagctgtagctgctaccgctgctgccaagatgatgccagat
ggccaacactctcctgctcactacgggatggaacaaccctcttcacctcgttacgcatct
gagccaccccctctagccggccagccggtctacactgacgtcaacggccatcccctggtc
cctcggcggcagcagcctgcagccacctgcctggtggtggaccctaacactcaggggctg
gatgggagcatgcagcagcgaggtatgatgataaggcaggagtgcactttgccctacagc
gttcaacaacaagttccgcagcccaacatgcaggtctacaaccccaaccctcctctctcc
tcccctgttcctgcacctgctcctgcccctcttcctctcccaccagcccctgtagccctc
ccccctccacctcctacagccaaccagacgcctgcagcctcagtggatcccaagaggaac
gctgacccagagttcctggctctgcttcgtaatgagggtctctcagagagtaccatctcc
tcacttatcaagcagggctttgacacaacaggcatgctggcagtcatggaggagaatgac
gtgcgctctgtggctcccaacctagggcaggcgcgggtgctgtcacgggtagccatcagc
gtcaagaggcccttagagccccctcccacgccccagcaacaggaccccatgcggggccgc
tccaacagcttcagccaccgctctgacatgtacctccagcagcagcagcaccagcaggcc
atgggcatggacccccggctgatgccaccacagacccctggtgccatgcagaccatctcc
cccacgatagccgaggccatggccaggaggcccaacagtgctccctctcagcaccttcta
gaaaccacacagggctacccaggacctcgtacaccagggacctacaatggcgccatggtc
cctgtccagtcccggcccatgtctgcattctcccaacacccgggtgtccccatgccgccg
ggcatgcagatgatggctgccatgccccagcagatgcaagccatgcaacaacagcaaatg
ccagtgtccatgcctgcccagccgtcacctcagcaggccccgaaggcatactccaccaac
tacacagtgcctatggagctgatgaaacggggccgcagcctgcaacccatgtcacccatg
cacagcgcccaccccaaccctcagatgatacgcaaggctgggggcaccccgtccgatgga
gccatgatgcccgtgggtaccaccatgcagaaccagagtgctatggccaccaaccagaag
cttagccgccgtaccggcccacctgtcatcgtctccaccatggcatcaccagatacaagt
atccggccccagatcatgaatgggcccatgcaccctcgccccctagtggccctgttggat
ggacgtgactgtacagtcgagatgcctatcctcaaagacctggccactgtcgccttctgt
gacgcccagtccacacaggagatccatgagaaggtgctgaacgaggcagtaggggccatg
atgtaccacaccatcaccttgaccagagaagacctggagaaattcaaggctctacgcatc
atcatccgcatcggcagcggctacgacaacatcgacatcaaggcagccggagagatgggc
atcgcggtgtgtaacatcccatcggcagcggtggaggagacagccgactccactctgtgc
catattctcaacctgtaccggcggaacacctggctgtaccaggctctccgggagggtaca
cgggtccagagtgtggagcagatcagagaggtggcgtccggagccgccaggatccgagga
gaaacactgggcctcatcggctttggtcgttcagggcaggcggtggcggtgcgggccaag
gtgtttggcttcaacgtgatcttctacgacccgtacctgcaggacggtctggagcgttcg
ctgggtgttcagcgtgtctacaccctgcaggacttgctctaccagagtgactgtgtctcc
ctgcactgcaacctgaacgaacacaaccaccacctcatcaacgacttcaccatcaaacag
atgcgtcagggtgcgttcctggttaactctgcgcggggaggtctggtggatgagaaggcc
ttggctcaggccctgaaagagggcaggatacggggggccgccctggacgtccatgagtca
gaacccttcagttttacccagggtcctctgaaggatgctcctaacttgatctgtactcct
cacacggcctggtacagtgaacaggcctcgctggagatgagagaggcagccgccacagag
atacgcagagccgtcactggccgtatcccagacagtttacgaaactgtgtcaacaaggag
ttctttgttaccacagctccctggacggtggaacagcagcaaatgcagcagcaaatgcac
cccgaactcaacggtgccgcatacaggtacccccctggtgtggttggtgtggcctctggt
gggatccatgggccaatggaggggatggtgcctgggggggtgcccatcgcccacaccctt
ccctccggtacccacccctcccaggccccgtcccccaaccaaccctccaaacacggggag
cccatgagagagcacatgaccgagccataa
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