Coregonus clupeaformis (lake whitefish): 121571164
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Entry
121571164 CDS
T08357
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121571164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121571164
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
121571164
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
121571164
NCBI-ProteinID:
XP_041738433
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Position
8:13037461..13050539
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AA seq
523 aa
AA seq
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MTKEHRGWDLKGLLKRNWLLIATIVSVLLGIGLGVVVREYASLSHLEKQYFGFPGDILMR
MLKLVILPLIISSMITGVAALDSDVSGKIGLRAVVYYLSTTIIAVILGIALVITIKPGVS
QEAEHIDRTEITENVNTVDTLLDLVRNMFPENIVQACFQQYKTMRKELEPSKVKVNTTTT
MFPPLSTTVMATIFPPENITKDYMIVGSYSDGINVLGLIVFCVAFGLVIGKMGERGRILL
EFFDALNEATMRLVQIIMCYMPVGILFLIAAKIIEVEDWEIFRKLGLYMVTVLSGLAIHS
TIFLPLIYFVIVRKNPYTFALGMAQALVTALMISSSSATLPVTFRCAEENLRIDKRITRF
VLPVGATINMDGTALYEAVAAIFIAQLNDYDLDVGQIVTISITATVASIGAAGVPNAGFV
TMVIVLTAVGLPANDVTLIIAVDWLLDRFRTMINVLGDAYGAGIVQKLSMRELERMDVTS
DVTNPFAPETRLDDEECDKKSYVNGGFTIDKTDAISFTEISQF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagaacacaggggctgggacctcaaaggcttgctgaagaggaactggctgctg
attgcgaccattgtgtcggtgctgttagggataggccttggggtggtggtcagggaatat
gcctctctctcccacctcgaaaagcagtattttggattcccgggagatatcctgatgcgg
atgctcaagctggtcatcctacccctcatcatctctagcatgataaccggagtggccgcc
ctggattcggatgtttccggaaagataggtttgagggctgtggtttattacttgtccacc
accatcattgcagtcattctgggtattgcgttggtgataaccatcaaacctggcgtctct
caggaggcagaacacatcgacaggacagagatcacagaaaacgtcaacacagtcgacacg
ctactggatcttgtcagaaacatgtttcctgaaaacatagtacaggcttgtttccaacag
tacaagacaatgcgcaaagagttggaaccctctaaagtgaaggtgaacactacaactaca
atgttccctcctctctctaccactgtcatggcaaccattttccccccagagaacatcacc
aaggactatatgatagtcgggtcatattctgatgggatcaacgtgctgggtctcatcgtg
ttctgtgtggcgttcggcctcgtcatcggcaagatgggtgaaaggggacgcatcctgctg
gagttctttgatgctttaaacgaggccaccatgaggctagtccagattatcatgtgctac
atgccagtggggatactcttcctcatcgctgccaagatcattgaggtagaagactgggag
atcttcaggaagttgggcctgtacatggtgacagtgttgagtggcctagctatccactct
accatttttctgccgctgatctactttgtcatcgtgaggaagaacccgtatacctttgcc
ttggggatggcccaggcactggtcactgctcttatgatctcttccagctctgccaccctg
cctgtcaccttccgctgtgccgaagagaacctccggatcgacaagaggatcacccgcttc
gtgttgcccgtgggcgccaccatcaacatggacggtacggctctctacgaggcggtcgct
gccatcttcattgcccagctcaacgactacgatcttgatgtgggtcagattgtcaccatc
agtataacagcaactgtagccagcatcggagccgccggtgtacctaacgctggctttgtt
accatggtgattgttctgactgccgttggactaccggcaaatgatgtcactttaattatt
gctgtggattggctgctagaccgcttccgcaccatgatcaacgtgctgggggatgcctat
ggagctggcatcgtccagaagctgtccatgcgggagctggagaggatggacgtcacctcg
gacgtgaccaaccccttcgccccggagaccaggctggatgacgaggagtgtgacaagaag
tcctacgtcaacggtggcttcaccatcgacaaaaccgacgccatctccttcaccgagatc
tcccagttttag
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