Coregonus clupeaformis (lake whitefish): 121571168
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Entry
121571168 CDS
T08357
Name
(RefSeq) ubiquitin thioesterase Zranb1
KO
K11862
ubiquitin thioesterase ZRANB1 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121571168
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121571168
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121571168
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C64
121571168
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
121571168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AnkUBD
OTU
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
121571168
NCBI-ProteinID:
XP_041738440
LinkDB
All DBs
Position
1:complement(58446949..58487722)
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AA seq
748 aa
AA seq
DB search
MTELGAKWACEYCTFENWPSAIRCTMCRAQRPSGGAIITVEPFRSSPGLDASRQWEPLSL
SHSNILPQGGSSLLICPDSSARPRVRIRDSPEPLSSKWSCHMCTYLNWPSAIRCTQCLCQ
RHQGHQQEQRHQGLAQQPRSPTESPQTSGSGCRPAPPSTPTDPCEEYNDRNRLNTHAQHW
PCAACTYANWPKACKCVVCDHSRPNSLAKPIELASKPEILPPSILNKQDSDNRKGGGGVS
VGRGGGGVVGCSGGQRRSPHTSKREAEVKMDFQRIELASGAGVESIEERQVDFKRLKQIK
NRMRRTDWLFLNACAGVVEGDLAAVEAYKSSGGDIARQLTSDEVRLLNRPSAFDDGFTLV
HLAIRFQRQDMLAVLLTEVSQQAAKCIPAMVCPELTEQIRREVAASLQQRKGDFTCYFLT
DLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINWSIELGTRLDSRLYALW
NRTAGDCLLDSVLQATWGIYDKDSVLRKTLHDTLHNCSHWFYTRWKEWESWYSQSFGLHF
SLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYT
RFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGFDNRGAGANLNTDDDVTVTF
LPLVDSERKLLHIHFLSAQEMGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLV
TQMVEKWLDGYRQIRPCASLSDGEEDDE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctgggtgccaagtgggcctgtgagtactgcacgtttgagaactggccttcg
gccatcaggtgcaccatgtgccgcgcccagaggcccagcgggggcgccatcatcaccgtg
gagcccttccggagcagccctggcctggacgccagccgccagtgggaacccctgagtctg
agtcacagcaacatcctgccccagggaggctccagcctcctaatctgcccagactccagt
gcccgcccccgtgtccgcatcagagactcccccgagcccctctccagcaagtggtcctgc
cacatgtgcacctacttaaactggcccagtgccattcgctgcacccaatgtctgtgccag
cggcatcagggacatcagcaggagcagcgccaccaggggttggcgcagcagccacgcagc
cccactgagtcaccccagacctcaggctcaggatgccgacccgcacccccctccacccct
acggacccctgcgaggagtataacgaccgcaaccgcctcaacacccacgcccagcactgg
ccctgtgccgcctgcacttatgcaaactggcccaaagcgtgcaaatgtgtggtgtgtgac
cactccaggcccaatagcttggcaaaacccatcgaactggcctcgaagcccgagatccta
ccaccctccatactcaacaagcaggacagtgacaacaggaaggggggtgggggtgtgagt
gtgggaagaggcggaggtggagtagtggggtgcagcggtggccagagaaggtccccacac
acctccaagcgggaggcggaggttaaaatggactttcagaggatcgagctggcatcggga
gccggagtggagagcatagaggagcggcaggtggactttaagaggcttaaacagataaag
aacaggatgaggaggactgactggttgtttctcaatgcctgtgcaggtgtggtagagggg
gacctggctgcagtagaggcctataaatcatcaggtggggacatcgccaggcagctgacg
tccgacgaggtgcgtcttctcaaccggccctctgcctttgacgatggcttcaccctggtc
cacctggccatccgcttccagaggcaggacatgctggccgtgctcctcactgaggtgtcc
cagcaggcagctaagtgtatcccagccatggtgtgccctgagctgacggagcagatacgc
cgtgaggtggctgcctccctgcagcagcgcaagggagacttcacctgctacttcctcact
gacctggtcaccttcacgctgccagcagatatcgaggacttgcccccaacagttcaggag
aaactgtttgacgaggtgctagaccgagatgtacagaaagagctggaggaggagtctccc
atcatcaactggtctatagagctaggaacgcggttggacagcaggctgtatgccctgtgg
aaccgcacggccggggactgcctgttagactcagtactgcaggccacctggggcatctat
gacaaggactctgtcctccgcaagacccttcacgacaccctgcacaactgctcccactgg
ttctacacgcgctggaaggagtgggagtcatggtattcccaaagcttcggcttgcatttc
tcactcagggaggaacagtggcaggaagactgggctttcatcctctcactggccagccag
cctggagccagcctggagcagactcatatttttgttcttgcacacattcttcgtagacca
atcatcgtctatggagtgaagtattacaaaagtttccgtggtgaaacacttgggtacacc
cgttttcaaggtgtgtacttgcccctgctgtgggagcagagtttctgttggaagagtccc
atcgctctgggctacacccgcggccacttctctgcactggtggccatggagaatgacggc
ttcgacaatcggggtgcaggcgccaacctcaacacagacgatgacgtcacagtcaccttc
ctaccgctggtagacagtgagagaaagttgctccacatccactttctctcagcacaagag
atggggaatgaggagcagcaggagaagctgctcagggagtggttggactgctgtgtgaca
gagggtggagtgctggtggccatgcagaagagctcccgccggcggaaccaccccctggtc
acacagatggtggagaagtggctggacggctaccgacagatccgcccctgtgcctcgctc
tcagacggtgaggaagatgatgagtaa
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