Coregonus clupeaformis (lake whitefish): 121571215
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Entry
121571215 CDS
T08357
Name
(RefSeq) homeobox protein SIX6 isoform X2
KO
K19473
homeobox protein SIX3/6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121571215
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
121571215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121571215
NCBI-ProteinID:
XP_041738486
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Position
8:complement(16947185..16953809)
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AA seq
261 aa
AA seq
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MFPLPMFTPEQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGEALNRHESVMRARALV
AFHGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFP
LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNWFKNRR
QRDRAASAKNRLQQDPTHLPSGCSPKGSVQEHHAHHPRLLAASPRHPGSPEASDCSTGTE
PRGTGASTPDISVSSDSEFES
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttccctttgcctatgttcaccccggaacaagtggctcgggtgtgcgagaacctcgag
gagaccggcgacatcgagcgcctggggcggttcttatggtccctgcctgccgctgtccct
ggctccgccggggaggctctcaaccgccacgagtcagtgatgcgcgcccgggcgttggtc
gccttccacggaggaaacttcgaggcgctttaccagatcctccaaagccaccgctttacg
cgcgagtctcacgcgaaactccaagatctgtggctggacgcgcattaccgcgaggcggag
cggctccggggccgtcccctgggacccgtggagaagtaccgcatccggaagaagttccca
ctgcctcgcaccatctgggacggcgagcagaagacgcactgctttaaggagagaactcgc
agcctgctcagggagtggtacctccaggacccctacccaaacccgtccaggaaacggcac
ctggcccaggccacgggactcacgcccacacaggtcggcaactggttcaagaaccgacgc
cagagagacagggccgcgtcggcaaagaacagactgcagcaggatcccacccacctgcct
tctggatgctcccctaaaggttctgtccaggagcaccacgctcaccacccccgcctgctg
gccgcctccccccgtcacccgggcagccccgaggccagcgactgcagcacgggcaccgaa
ccccggggcaccggagcctccacccccgacatctctgtcagcagtgacagcgagtttgaa
tcctga
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