Coregonus clupeaformis (lake whitefish): 121571246
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Entry
121571246 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04110
Cell cycle
cclu04114
Oocyte meiosis
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121571246
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121571246
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121571246
03036 Chromosome and associated proteins [BR:
cclu03036
]
121571246
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121571246
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121571246
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121571246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
121571246
NCBI-ProteinID:
XP_041738522
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All DBs
Position
8:19956047..20021348
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AA seq
514 aa
AA seq
DB search
METTKLPPTSPSSPTTGFSVPSAEKVDGFPRRSMRRARQRRSHSSSQFRYQSSQVELTAL
PLLKDAPVAELHDLFCKKLQQCCVLFDFLDCVADLKGKEIKRAALNELVESVATSRGVLI
EPLYPEAIKMISVNIFRTLPPSENPEFDPEEDEPTLEASWPHLQLVYEFFLRFLESPDFQ
PSMAKRYVDQKFVLQLLELFDSEDPREREYLKTILHRVYGKLLGLRAYIRKQINNIFLRF
IYETEHFNGVAELLEILGSIINGFALPLKSEHKQFLVRVLIPLHSAKSLSIFHAQLAYCV
VQFMEKDSTVTEYIIRGLLKYWPKTCTQKEVMFLGEIEEILDVIEPSQFIRVQEPLFKQI
AACISSPHFQVAERALYFWNNEYILSLIEENCQVILPLVFATLYTVSKEHWNQTIVSLIY
NVLKTFMEMNSKLFDDLTASYKVEKQKELKRECERAELWRGLEEQQERRLQTLGEASRNQ
KNLQERGEPPQPSSPQTAFPEQPNPELSGASSNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccaaactgcccccgaccagcccgtcctccccgaccaccgggttctctgta
ccgtcagcggagaaggtggatgggtttccccggcgctcgatgcgcagagcccggcagagg
cgctcccactcctcgtcccagttccgctaccagagctcccaggtcgagctgacggcactg
ccgctactcaaagatgcccctgtggcagagctccatgacctgttctgtaagaagctgcag
cagtgctgcgtcctctttgacttcctggactgtgtggcagacctgaaggggaaagagatc
aaacgagctgcgctcaacgaactggtggagtctgttgctacaagcagaggagttctgata
gagccactctacccagaggctattaagatgatctcagtgaatatcttcaggacgttacct
cccagtgagaacccagagtttgacccggaggaggatgaacccactctagaggcctcctgg
ccacacctgcagctggtgtatgagttctttctgcgtttcctggagagcccagacttccag
ccctccatggccaaacgctatgtcgaccagaagtttgttcttcagctgttggaattgttt
gacagtgaagatccgagggagagagagtacctcaagaccatcctgcatcgtgtctacggc
aaactgctcggcctgcgggcgtacatacgcaaacagatcaacaatatcttcctcaggttt
atctatgagactgagcacttcaacggtgtggcagagctactggagattctgggcagcatt
ataaacgggtttgctctgcccctgaagtcggaacataagcaattcctggttcgagtcctg
atccctctacactcagccaagtccctgtccatcttccacgcacagttggcgtactgtgtg
gtccagtttatggagaaagattctacagtcacagaatacatcatacgagggctcctcaag
tactggcccaaaacctgcacccagaaagaggtgatgttcctaggggagatagaggagata
ctggatgtgatcgagccatctcagtttatccgtgttcaggagcctctcttcaaacagatc
gctgcctgcatctccagcccacacttccaggtagcggagagggctttgtacttctggaac
aacgagtacatcctgtctctgatagaggagaactgtcaggtgattctacctctggtcttc
gccacgctctacacagtgtccaaggagcactggaaccagactatagtctctctgatctac
aacgttctgaagacctttatggagatgaacagcaagctgtttgatgacctcactgcctct
tacaaagtggagaaacagaaggagttgaagagggagtgtgagcgtgcagagctgtggcgg
gggctggaggagcagcaggagaggagactgcagaccctgggggaggccagtcgcaatcag
aagaacctccaggagagaggggagcctcctcagccctcctccccacagacagcattccct
gagcagccaaaccccgagctcagcggagcctcctctaacacctag
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